PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026383004.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

AP2

Protein Properties

Length: 694aa MW: 75053.7 Da PI: 6.6648

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026383004.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	44.6	3.6e-14	277	336	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d + g ++ ++++lg ++ +++Aa+a++ a++k++g XP_026383004.1 277 SIYRGVTRHRWTGRYEAHLWDnSCRrEGqtRKgRQVYLGGYDKEDKAARAYDLAALKYWG 336 57*****************666664478446******99***********98 PP
2	AP2	46.7	7.9e-15	379	430	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g XP_026383004.1 379 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 430 57**************988532...5**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 694 aa Download sequence
MASSMNNWLG FSLSPQEVVP TQSQTHHHAS NVSRHGFNSD EVSGSEVVSS DCFDLGSHDS 60 SGPTGAYGIL EAFNRNHQQQ HDWSGNNFKS SSELSMLMGG SNNNQHQHHL SHQEEPKLED 120 FLGGHSFSDH DQQKLHGVAN NNNNNNNNGS LGLSMIKTWL RNQPAPPQQE NKDEVGNSTC 180 GGGGGVGDGV VGSNGQTLSL SMSTGSQSSS PALPLVTTAS TVVTGGGGGS GGAESSSSEN 240 NKQKTNGTTT ALDSPTAGAI VEAVPRKSID TFGQRTSIYR GVTRHRWTGR YEAHLWDNSC 300 RREGQTRKGR QVYLGGYDKE DKAARAYDLA ALKYWGSTTT TNFPIANYEQ ELEDMKNMTR 360 QEYVASLRRK SSGFSRGASI YRGVTRHHQH GRWQARIGRV AGNKDLYLGT FSTQEEAAEA 420 YDIAAIKFRG LNAVTNFDMS RYDVSSIMES STLPIGGAAK RLKEAEQIAE ASVDARRAES 480 DNLTSQLTNG INNYGWPTIA FQQAQPISML YPYNQQRSGW CKQEQEAAAA AHSFQDLHQL 540 QLGSTHHNFF QPSVLHNLMS QDSSSLEHSS GSNSVIYNGG GGTGSGASNG SYQMGGSNGY 600 LPMGMVMSSE HQNNPTGSSF VENDLKQQMG YDSIMSSNST DPYSQGRNAY YMSQQSPPAC 660 NNWMPTGVQA LAPRSNNLAV CHGAPSTFTV WNDA

Sequence ? help Back to Top

Protein Sequence Length: 694 aa Download sequence

MASSMNNWLG FSLSPQEVVP TQSQTHHHAS NVSRHGFNSD EVSGSEVVSS DCFDLGSHDS  60
SGPTGAYGIL EAFNRNHQQQ HDWSGNNFKS SSELSMLMGG SNNNQHQHHL SHQEEPKLED  120
FLGGHSFSDH DQQKLHGVAN NNNNNNNNGS LGLSMIKTWL RNQPAPPQQE NKDEVGNSTC  180
GGGGGVGDGV VGSNGQTLSL SMSTGSQSSS PALPLVTTAS TVVTGGGGGS GGAESSSSEN  240
NKQKTNGTTT ALDSPTAGAI VEAVPRKSID TFGQRTSIYR GVTRHRWTGR YEAHLWDNSC  300
RREGQTRKGR QVYLGGYDKE DKAARAYDLA ALKYWGSTTT TNFPIANYEQ ELEDMKNMTR  360
QEYVASLRRK SSGFSRGASI YRGVTRHHQH GRWQARIGRV AGNKDLYLGT FSTQEEAAEA  420
YDIAAIKFRG LNAVTNFDMS RYDVSSIMES STLPIGGAAK RLKEAEQIAE ASVDARRAES  480
DNLTSQLTNG INNYGWPTIA FQQAQPISML YPYNQQRSGW CKQEQEAAAA AHSFQDLHQL  540
QLGSTHHNFF QPSVLHNLMS QDSSSLEHSS GSNSVIYNGG GGTGSGASNG SYQMGGSNGY  600
LPMGMVMSSE HQNNPTGSSF VENDLKQQMG YDSIMSSNST DPYSQGRNAY YMSQQSPPAC  660
NNWMPTGVQA LAPRSNNLAV CHGAPSTFTV WNDA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51190.1	1e-128	AP2 family protein