PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026383003.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

AP2

Protein Properties

Length: 724aa MW: 78179 Da PI: 6.5672

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026383003.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	44.5	3.9e-14	307	366	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d + g ++ ++++lg ++ +++Aa+a++ a++k++g XP_026383003.1 307 SIYRGVTRHRWTGRYEAHLWDnSCRrEGqtRKgRQVYLGGYDKEDKAARAYDLAALKYWG 366 57*****************666664478446******99***********98 PP
2	AP2	46.6	8.3e-15	409	460	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g XP_026383003.1 409 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 460 57**************988532...5**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 724 aa Download sequence
MASSMNNWLG FSLSPQEVVP TQSQTHHHAS NVSRHGFNSD EVSGSEVVSS DCFDLGSHDS 60 SGPTGAYGIL EAFNRNHQQQ HDWSGNNFKS SSELSMLMGG SNNNQHQHHL SHQEEPKLED 120 FLGGHSFSDH DQQKLHGYDH SGDYMFSNCS LQLPAATVSN SNGYGGSVAN NNNNNNNNGS 180 LGLSMIKTWL RNQPAPPQQE NKDEVGNSTC GGGGGVGDGV VGSNGQTLSL SMSTGSQSSS 240 PALPLVTTAS TVVTGGGGGS GGAESSSSEN NKQKTNGTTT ALDSPTAGAI VEAVPRKSID 300 TFGQRTSIYR GVTRHRWTGR YEAHLWDNSC RREGQTRKGR QVYLGGYDKE DKAARAYDLA 360 ALKYWGSTTT TNFPIANYEQ ELEDMKNMTR QEYVASLRRK SSGFSRGASI YRGVTRHHQH 420 GRWQARIGRV AGNKDLYLGT FSTQEEAAEA YDIAAIKFRG LNAVTNFDMS RYDVSSIMES 480 STLPIGGAAK RLKEAEQIAE ASVDARRAES DNLTSQLTNG INNYGWPTIA FQQAQPISML 540 YPYNQQRSGW CKQEQEAAAA AHSFQDLHQL QLGSTHHNFF QPSVLHNLMS QDSSSLEHSS 600 GSNSVIYNGG GGTGSGASNG SYQMGGSNGY LPMGMVMSSE HQNNPTGSSF VENDLKQQMG 660 YDSIMSSNST DPYSQGRNAY YMSQQSPPAC NNWMPTGVQA LAPRSNNLAV CHGAPSTFTV 720 WNDA

Sequence ? help Back to Top

Protein Sequence Length: 724 aa Download sequence

MASSMNNWLG FSLSPQEVVP TQSQTHHHAS NVSRHGFNSD EVSGSEVVSS DCFDLGSHDS  60
SGPTGAYGIL EAFNRNHQQQ HDWSGNNFKS SSELSMLMGG SNNNQHQHHL SHQEEPKLED  120
FLGGHSFSDH DQQKLHGYDH SGDYMFSNCS LQLPAATVSN SNGYGGSVAN NNNNNNNNGS  180
LGLSMIKTWL RNQPAPPQQE NKDEVGNSTC GGGGGVGDGV VGSNGQTLSL SMSTGSQSSS  240
PALPLVTTAS TVVTGGGGGS GGAESSSSEN NKQKTNGTTT ALDSPTAGAI VEAVPRKSID  300
TFGQRTSIYR GVTRHRWTGR YEAHLWDNSC RREGQTRKGR QVYLGGYDKE DKAARAYDLA  360
ALKYWGSTTT TNFPIANYEQ ELEDMKNMTR QEYVASLRRK SSGFSRGASI YRGVTRHHQH  420
GRWQARIGRV AGNKDLYLGT FSTQEEAAEA YDIAAIKFRG LNAVTNFDMS RYDVSSIMES  480
STLPIGGAAK RLKEAEQIAE ASVDARRAES DNLTSQLTNG INNYGWPTIA FQQAQPISML  540
YPYNQQRSGW CKQEQEAAAA AHSFQDLHQL QLGSTHHNFF QPSVLHNLMS QDSSSLEHSS  600
GSNSVIYNGG GGTGSGASNG SYQMGGSNGY LPMGMVMSSE HQNNPTGSSF VENDLKQQMG  660
YDSIMSSNST DPYSQGRNAY YMSQQSPPAC NNWMPTGVQA LAPRSNNLAV CHGAPSTFTV  720
WNDA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51190.1	1e-128	AP2 family protein