PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026382822.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

bHLH

Protein Properties

Length: 294aa MW: 31498.2 Da PI: 8.4765

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026382822.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	42	1.7e-13	72	119	2	54
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +++h+e+ErrRR+riN +++Lr+llP+ K +Ka+ L ++v+++k+L XP_026382822.1 72 CKSHSEAERRRRERINGHLATLRTLLPNT-----IKTDKASLLAEVVQHVKEL 119 789***********************8.....69*************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 294 aa Download sequence
MIPFPNYYGS VDTWAAAATN NSNHSVGYNL PHQQFHSSST TMDMGSNDNN AGIATTSSNS 60 KSMTDQKALA ACKSHSEAER RRRERINGHL ATLRTLLPNT IKTDKASLLA EVVQHVKELK 120 KIANDITGAN RDGDGCYNNT AEWWPFPQET DELTLNYYCE ASSSTSMDEL LLSSSSLLLI 180 RVSLSCDDRP DLMADLTLAL KSVGAKVVKA EITTVGGRLK SILIIQSGVG GGGGNGLGDL 240 GTLRRALKAV LDKPSPSTSS SVSVGNMGAQ GNNSNNSKRP RFCRRFGSSS HSEL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	79	84	ERRRRE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68810.1	4e-33	bHLH family protein