PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026382519.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

bHLH

Protein Properties

Length: 444aa MW: 49770.2 Da PI: 4.857

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026382519.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	27.6	5.2e-09	274	319	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++ ++Er+RR +++++++ Lr+++Pk +K++ ++L + YI +L XP_026382519.1 274 KNLIAERNRRTKLKERIHSLRSVVPKI-----TKMDILSTLGDSISYIMEL 319 56689*******************7.....6*************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 444 aa Download sequence
MNQVEWLRPL VRSKFWDYGV VWKLRNDETS ALEWLGCCCG GAEDDIQDGG EEGHLYKPCR 60 DLMFQHLRKS NACEAIAKLP TTITLASGIH GKVLISGKAR WLRLESSSSQ NEKAGTKLLI 120 PYLGCLIELY VANNVPRDQN IIDFVISLYN TTLEQQTMNQ FQDFLPSFPP LMEELKGIPV 180 HQYLPVTTQH NFDRSYEGSS TGSIPSDDPA SLDSGFNYSS QSLCASTQSG GGGIVGSYLF 240 GQNMDLMPSC SSGLMEENEE HLKVAAGPEK HKSKNLIAER NRRTKLKERI HSLRSVVPKI 300 TKMDILSTLG DSISYIMELK NKVTDLQNEL KDMEEEENYN RDELEESEEY QDPSIDTTHD 360 IKVQVEVKRI GAKEFLLNFF GRQTQGGFLK LMEAVNSAGL TVTNANVTNF KGMASYILIL 420 AADHEEVQEQ EVKDLLLNLT HSNG

Sequence ? help Back to Top

Protein Sequence Length: 444 aa Download sequence

MNQVEWLRPL VRSKFWDYGV VWKLRNDETS ALEWLGCCCG GAEDDIQDGG EEGHLYKPCR  60
DLMFQHLRKS NACEAIAKLP TTITLASGIH GKVLISGKAR WLRLESSSSQ NEKAGTKLLI  120
PYLGCLIELY VANNVPRDQN IIDFVISLYN TTLEQQTMNQ FQDFLPSFPP LMEELKGIPV  180
HQYLPVTTQH NFDRSYEGSS TGSIPSDDPA SLDSGFNYSS QSLCASTQSG GGGIVGSYLF  240
GQNMDLMPSC SSGLMEENEE HLKVAAGPEK HKSKNLIAER NRRTKLKERI HSLRSVVPKI  300
TKMDILSTLG DSISYIMELK NKVTDLQNEL KDMEEEENYN RDELEESEEY QDPSIDTTHD  360
IKVQVEVKRI GAKEFLLNFF GRQTQGGFLK LMEAVNSAGL TVTNANVTNF KGMASYILIL  420
AADHEEVQEQ EVKDLLLNLT HSNG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G16910.1	2e-64	bHLH family protein