PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026382503.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

NAC

Protein Properties

Length: 385aa MW: 43107.2 Da PI: 6.6948

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026382503.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	104.1	1.8e-32	56	197	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkk......leleev.ikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra........tks 80 p+G++F+Ptd el+ e+L++k++ + ++++ i++ +i++++P++Lp +k++ ++++fF++++k+yatg+rk+r ++ XP_026382503.1 56 PAGVKFDPTDAELL-EHLAAKLSPGNlkphtfIDEFIPsIESQeGICYTHPKNLP-GAKKDGSSVHFFHRTSKAYATGHRKRRRihgelsstEEH 148 89**********.99*99995655443332233555547******.55677899***************757888874448 PP NAM 81 gyWkatgkdkevlskkgelvglkktLvfykg..rapkgektdWvmheyrl 128 +W++tgk+k+v++ +g ++g kk++v+yk + +k+ k++Wvmh+y+l XP_026382503.1 149 VRWHKTGKKKPVVH-NGIQKGFKKIMVLYKSsiKGSKPDKSNWVMHQYHL 197 89********.99********6434677777*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 385 aa Download sequence
MARSWLIDSK GIASKVKNAP HFSSYQIKDC GASRECPNCL HRIDNSDVAV EWPGFPAGVK 60 FDPTDAELLE HLAAKLSPGN LKPHTFIDEF IPSIESQEGI CYTHPKNLPG AKKDGSSVHF 120 FHRTSKAYAT GHRKRRRIHG ELSSTEEHVR WHKTGKKKPV VHNGIQKGFK KIMVLYKSSI 180 KGSKPDKSNW VMHQYHLGTN EEEMEGEFVV SKIFYQQPPK HTDTGDIQTT PSTPNTNTPD 240 PPRPEKRAKL NELDKENIGY PSVHQDVEVS SKSLQLPAEV VCFGVERSTA AWWAGESQAV 300 ENPDPDGIDI SLLCHENHEI LNESGIKKVS CLSDWDRNRN DNGDLSTAFG LADLDSLALG 360 TPPEFEPGDW QFGSQQSFTS WFDRL

Sequence ? help Back to Top

Protein Sequence Length: 385 aa Download sequence

MARSWLIDSK GIASKVKNAP HFSSYQIKDC GASRECPNCL HRIDNSDVAV EWPGFPAGVK  60
FDPTDAELLE HLAAKLSPGN LKPHTFIDEF IPSIESQEGI CYTHPKNLPG AKKDGSSVHF  120
FHRTSKAYAT GHRKRRRIHG ELSSTEEHVR WHKTGKKKPV VHNGIQKGFK KIMVLYKSSI  180
KGSKPDKSNW VMHQYHLGTN EEEMEGEFVV SKIFYQQPPK HTDTGDIQTT PSTPNTNTPD  240
PPRPEKRAKL NELDKENIGY PSVHQDVEVS SKSLQLPAEV VCFGVERSTA AWWAGESQAV  300
ENPDPDGIDI SLLCHENHEI LNESGIKKVS CLSDWDRNRN DNGDLSTAFG LADLDSLALG  360
TPPEFEPGDW QFGSQQSFTS WFDRL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	133	137	RKRRR
2	134	138	KRRRI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01600.1	7e-93	NAC family protein