PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026382495.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family C3H
Protein Properties Length: 329aa    MW: 37775.5 Da    PI: 9.1933
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026382495.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH22.71.7e-07161181425
                     ---SGGGGTS--TTTTT-SS-S CS
         zf-CCCH   4 elCrffartGtCkyGdrCkFaH 25 
                     ++Crf+ar G+Ck+G+ C++ H
  XP_026382495.1 161 PPCRFYAR-GICKRGAECPYRH 181
                     79******.*********9977 PP
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    
MSHRFLLDPE ADGWERSDFP IFCKSCLVDN PYVRMTRADY DDECKICNRP FTVFRWRPGQ  60
DARYKKTVIC RTCTKIKHVC QVCLLDLDYG LPVQVRDTAS STYSGDYIPK SDVNREYYAE  120
EYDRKARLGT DHESSYGKMQ PCDTIRKLQR TAPYYQRNRA PPCRFYARGI CKRGAECPYR  180
HEIPVTGELS RQNIKDRYYG VNDPVAAKLL RKAGEMPSLA SRQQAAAHTG SPPSYYNSLH  240
PPPSRTSYPS MNPQRMGAQV PFLEGFNNRL SGSTDAQQRK HYSYQNSSPP SQGYYPPYHP  300
PYVPSPSPDQ QYHHQRTGLR LPPAMGAQS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1123129DRKARLG