PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026382064.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

CAMTA

Protein Properties

Length: 966aa MW: 108677 Da PI: 5.5123

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026382064.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	144.1	3.7e-45	15	129	3	115
CG-1 3 ke.kkrwlkneeiaaiLenfe.kheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfq 95 +e + rwl++ ei iL n++ + +t+ +++p+sgsl+L+n+ +++ frkDG++wkkk+ g+tv E he+LKvggvevl+cyYa++ enp+++ XP_026382064.1 15 QEaQVRWLRPVEIQFILLNHDgIYPFTEVVPQNPQSGSLFLINKNVTKSFRKDGHNWKKKRSGRTVAEGHERLKVGGVEVLSCYYAQGAENPNLR 109 56599***********99846889999************************************************************** PP CG-1 96 rrcywlLeeelekivlvhyl 115 rr+yw+L++++++ivlvh++ XP_026382064.1 110 RRIYWMLDQAYHHIVLVHHR 129 ****************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 966 aa Download sequence
MNDPDSEYDI NTLIQEAQVR WLRPVEIQFI LLNHDGIYPF TEVVPQNPQS GSLFLINKNV 60 TKSFRKDGHN WKKKRSGRTV AEGHERLKVG GVEVLSCYYA QGAENPNLRR RIYWMLDQAY 120 HHIVLVHHRV YTDINEGRRS AESSSTLNFP SVSNTGFQIA PNQAAASAVS ESYGTYLDPS 180 PFSSGSMDLI PDLLDEKLFE EWDSPEDICS LMDADEGSLA EQRIVENLNE KSTDTEILLQ 240 QNMSDLDELL AAQLGPDYGE NVVHSCEIEK PQSTSERDKY TTDPYKNNEE YLYQLQDPSG 300 NNTQNRNVHI PIFGEASNFY PTASIQESSL LFAVDNSTVF SYSYGLNTLE ADPNCYSTLF 360 DAETQLAPIE VVSRLTVAQS QKFSIQEISP EWGYAAEFSK VIITGLFHCN SSEHSWKCMF 420 GDTEVPVEIV QEGVLRRQTP GQVSLIQEGV LRCHTPPQSP GKVSLCITVG NREACSEIRE 480 FEFRTNPTTC IQNNNLPKTD GMRSAEELQL LIRFVQMLLC YPSTDKEDGI TSRTNASEKL 540 NADEYLWENL KHAVLVGSES ESRIMDSLLQ ELLKEKLPQW LHSKFKEGET PGSANLKKDQ 600 EIIHVVAGLG FEWALNLILR SGIGINFRDT NGWTALHYAA YFGREEMVVA LLVAGASAGA 660 VTDPTPEDPV GKTPGSIAIF RGHKGVAGYL SELALTSHLR SLTLEESDNS KGLSAAEAEI 720 EAESLSNGIL DCTDDQRSLR QSLEAVRNAA LAAARIQNAF RAHSFRKRKQ KEDLVSVCHE 780 YGITAADIPA LSATSKMAFP KLRDQVLQNA AVIIQKKYRG WSRHRTFLEL KRKIILIQAH 840 VRGHQVRRKL FRWAVGILEK ILLRWRRKRV GLRGLRQETE LADVSDDEDI LKVFRKKKVD 900 VTVEKAVSWV VSMAHSPDAR GQYRRLLASY RQQVKAESCT ETSSASRDDS DSMETNNNDD 960 FFRFPL

Sequence ? help Back to Top

Protein Sequence Length: 966 aa Download sequence

MNDPDSEYDI NTLIQEAQVR WLRPVEIQFI LLNHDGIYPF TEVVPQNPQS GSLFLINKNV  60
TKSFRKDGHN WKKKRSGRTV AEGHERLKVG GVEVLSCYYA QGAENPNLRR RIYWMLDQAY  120
HHIVLVHHRV YTDINEGRRS AESSSTLNFP SVSNTGFQIA PNQAAASAVS ESYGTYLDPS  180
PFSSGSMDLI PDLLDEKLFE EWDSPEDICS LMDADEGSLA EQRIVENLNE KSTDTEILLQ  240
QNMSDLDELL AAQLGPDYGE NVVHSCEIEK PQSTSERDKY TTDPYKNNEE YLYQLQDPSG  300
NNTQNRNVHI PIFGEASNFY PTASIQESSL LFAVDNSTVF SYSYGLNTLE ADPNCYSTLF  360
DAETQLAPIE VVSRLTVAQS QKFSIQEISP EWGYAAEFSK VIITGLFHCN SSEHSWKCMF  420
GDTEVPVEIV QEGVLRRQTP GQVSLIQEGV LRCHTPPQSP GKVSLCITVG NREACSEIRE  480
FEFRTNPTTC IQNNNLPKTD GMRSAEELQL LIRFVQMLLC YPSTDKEDGI TSRTNASEKL  540
NADEYLWENL KHAVLVGSES ESRIMDSLLQ ELLKEKLPQW LHSKFKEGET PGSANLKKDQ  600
EIIHVVAGLG FEWALNLILR SGIGINFRDT NGWTALHYAA YFGREEMVVA LLVAGASAGA  660
VTDPTPEDPV GKTPGSIAIF RGHKGVAGYL SELALTSHLR SLTLEESDNS KGLSAAEAEI  720
EAESLSNGIL DCTDDQRSLR QSLEAVRNAA LAAARIQNAF RAHSFRKRKQ KEDLVSVCHE  780
YGITAADIPA LSATSKMAFP KLRDQVLQNA AVIIQKKYRG WSRHRTFLEL KRKIILIQAH  840
VRGHQVRRKL FRWAVGILEK ILLRWRRKRV GLRGLRQETE LADVSDDEDI LKVFRKKKVD  900
VTVEKAVSWV VSMAHSPDAR GQYRRLLASY RQQVKAESCT ETSSASRDDS DSMETNNNDD  960
FFRFPL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	847	869	RRKLFRWAVGILEKILLRWRRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67310.1	1e-152	CAMTA family protein