PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026382054.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | NF-YC | ||||||||
Protein Properties | Length: 213aa MW: 23908.8 Da PI: 5.2937 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 170.8 | 1.6e-53 | 39 | 138 | 4 | 100 |
NF-YC 4 sfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdi 95 +f ++q ie+ +dfknh+lPlarikki+kadedv+misaeaP+l+skacelfilelt+rswlhaeenkrrtl+k+di+aa+trtdifdflvdi XP_026382054.1 39 MFLSYQrqeIEQINDFKNHQLPLARIKKIMKADEDVRMISAEAPILFSKACELFILELTIRSWLHAEENKRRTLQKNDISAAITRTDIFDFLVDI 133 555544445************************************************************************************** PP NF-YC 96 vprde 100 vpr+e XP_026382054.1 134 VPREE 138 ***97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 213 aa Download sequence |
MENNKHLMNP NHNQSSTSPY PTQQSFESLM QQQTQKIQMF LSYQRQEIEQ INDFKNHQLP 60 LARIKKIMKA DEDVRMISAE APILFSKACE LFILELTIRS WLHAEENKRR TLQKNDISAA 120 ITRTDIFDFL VDIVPREEEV VKGGAVGAVA IGRPAMVGGM DHGVYEHQPS QAWQSVWQTD 180 DGGAYGGGGS AENHGNLEGI TGYVVEHNPS DSL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 109 | 115 | RRTLQKN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G63470.2 | 1e-73 | NF-YC family protein |