PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026381894.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | C3H | ||||||||
Protein Properties | Length: 503aa MW: 56253.9 Da PI: 7.3741 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 30.2 | 7.6e-10 | 75 | 100 | 1 | 26 |
--S---SGGGGTS--TTTTT-SS-SS CS zf-CCCH 1 yktelCrffartGtCkyGdrCkFaHg 26 ++++ C +f rtG C+yG +C+++H+ XP_026381894.1 75 PGEADCAHFVRTGSCRYGLKCRYNHP 100 57899********************9 PP | |||||||
2 | zf-CCCH | 33.7 | 6.2e-11 | 161 | 186 | 1 | 26 |
--S---SGGGGTS--TTTTT-SS-SS CS zf-CCCH 1 yktelCrffartGtCkyGdrCkFaHg 26 ++++ C +++rtG C+yG +C+++H+ XP_026381894.1 161 PGEPDCGHYLRTGACRYGLNCRYNHP 186 5789*********************8 PP | |||||||
3 | zf-CCCH | 31.4 | 3.3e-10 | 213 | 238 | 1 | 26 |
--S---SGGGGTS--TTTTT-SS-SS CS zf-CCCH 1 yktelCrffartGtCkyGdrCkFaHg 26 +++++C++++r G CkyG +C+F H XP_026381894.1 213 PGQVECKYYLRPGGCKYGTTCRFQHI 238 5789*********************5 PP | |||||||
4 | zf-CCCH | 28.9 | 2e-09 | 260 | 284 | 2 | 26 |
-S---SGGGGTS--TTTTT-SS-SS CS zf-CCCH 2 ktelCrffartGtCkyGdrCkFaHg 26 ++ +C++++r+G Ck+ +C+F+H+ XP_026381894.1 260 GETECPHYMRNGSCKFALNCRFHHP 284 7789********************8 PP | |||||||
5 | zf-CCCH | 24.7 | 4.2e-08 | 408 | 433 | 2 | 27 |
-S---SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 2 ktelCrffartGtCkyGdrCkFaHgp 27 ++++C +f+++G Ck+ + CkF H++ XP_026381894.1 408 GEKECEYFMKNGDCKFKSYCKFDHPK 433 7899********************96 PP | |||||||
6 | zf-CCCH | 32.8 | 1.2e-10 | 454 | 476 | 5 | 27 |
--SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 5 lCrffartGtCkyGdrCkFaHgp 27 C++++r+G+Ck+G+ C++ H+p XP_026381894.1 454 ACSYYSRYGICKFGPACRYDHPP 476 6********************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 503 aa Download sequence |
MVSIKELEDG DERLVFGSDS STSETAAAAV DVSVDDISLE GKIDNLGLGI KGKVSSFQRP 60 HDDENHNQNN HPVRPGEADC AHFVRTGSCR YGLKCRYNHP TRNKKVQVGN GKDKETEGFK 120 ERQWQLNRGF ERKQSQSWGD SAIEEEEEAE VNGSLHHPVR PGEPDCGHYL RTGACRYGLN 180 CRYNHPSRSK RQVHSSSVSH EPDQEKEGYE ETPGQVECKY YLRPGGCKYG TTCRFQHIQE 240 NPAVASTLDL NFLGLPVRPG ETECPHYMRN GSCKFALNCR FHHPNPTDVG VRDPHLRYQN 300 CRPSPVPSSV LSQPGVPFWS MARTSNETMV SYMDAAPSYA PLLSAPQGVH PSMEWNGYLP 360 PQQNPMYPPA VNMGPPVPLI LNGPSKKTGG FAHYQQQMPI DEYPERPGEK ECEYFMKNGD 420 CKFKSYCKFD HPKNRASKCV LSPMGLPLRP EEIACSYYSR YGICKFGPAC RYDHPPNSGS 480 SISGVVRMGS HGNVRQGLIQ QEV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G63260.1 | 3e-89 | C3H family protein |