PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026381472.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

ARR-B

Protein Properties

Length: 617aa MW: 70279.4 Da PI: 6.1848

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026381472.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	70.4	2.9e-22	215	267	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r++W+ +LH++Fv+av+q+ G + Pk+il+lm+v+ Lt+e+v+SHLQkYRl XP_026381472.1 215 KARVVWSVDLHQKFVNAVNQI-GFD-IGPKKILDLMNVPWLTRENVASHLQKYRL 267 68*****************.777.78************************8 PP
2	Myb_DNA-binding	38.1	3.6e-12	217	266	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ ++++++v+av+q G + +k+I m+ +t++++ s++qky+ XP_026381472.1 217 RVVWSVDLHQKFVNAVNQIGFDiGPKKILDLMNvPWLTRENVASHLQKYR 266 678**********************************************7 PP
3	Response_reg	80.4	6.1e-27	35	143	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl+vdD+p+ +++l+++l++ y ev+++ +++al+ll+e++ +D+++ D++mp+mdG++ll++ e +lp+i+++ ge + + + ++ G XP_026381472.1 35 VLVVDDDPTWLKILEKMLKRCSY-EVTTCCLARDALDLLRERKdgFDIVISDVNMPDMDGFKLLEHVGLEM-DLPVIMMSVDGETSRVMKGVQHG 127 89*******************.***********999999******************6644.8****************** PP ESEEEESS--HHHHHH CS Response_reg 94 akdflsKpfdpeelvk 109 a d+l Kp+ ++el + XP_026381472.1 128 ACDYLLKPVRMKELKN 143 **********9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 617 aa Download sequence
MVMDQYHHHH RSMEINNNGY VSSPRSDSFP IGLRVLVVDD DPTWLKILEK MLKRCSYEVT 60 TCCLARDALD LLRERKDGFD IVISDVNMPD MDGFKLLEHV GLEMDLPVIM MSVDGETSRV 120 MKGVQHGACD YLLKPVRMKE LKNIWQHVLR KKIHEVRDIE SYEGNEEILF RNGSERFEEG 180 NFLLGSDLSS GKKRKETDNK ECDDQEYSDF SSVKKARVVW SVDLHQKFVN AVNQIGFDIG 240 PKKILDLMNV PWLTRENVAS HLQKYRLYLS RLQKPNDPKS SFCGIKQPDF SQKDPPMTFA 300 HKSSSPVLQN TAANGSFGYT SSNLLVEGAA LETHEGDLNG IISFKSVTEP RSRKTLNGDV 360 PSPRKANNSQ IGFSHSLVLP ELDVNNISFE ANISQKHSWN REVPIMRMKQ LPKQEQKLYG 420 YTHLALLSQQ NKIQSESLQP SPSSINLGTS VGERDKACHL EIKPLHLEDK SDDFKHGFPT 480 APHISNLLQA DAENTSSQEF RPILRINTDL PCMKLQGYNQ HCTNTNASTW KPDQRNQIQG 540 NESTSYCSQQ ESHLGLLQDY LFIEDVELNN IASMNYHDPD MFADVPAHLL DKVRFTNDYL 600 CESTLEYPIM DQGLFIA

Sequence ? help Back to Top

Protein Sequence Length: 617 aa Download sequence

MVMDQYHHHH RSMEINNNGY VSSPRSDSFP IGLRVLVVDD DPTWLKILEK MLKRCSYEVT  60
TCCLARDALD LLRERKDGFD IVISDVNMPD MDGFKLLEHV GLEMDLPVIM MSVDGETSRV  120
MKGVQHGACD YLLKPVRMKE LKNIWQHVLR KKIHEVRDIE SYEGNEEILF RNGSERFEEG  180
NFLLGSDLSS GKKRKETDNK ECDDQEYSDF SSVKKARVVW SVDLHQKFVN AVNQIGFDIG  240
PKKILDLMNV PWLTRENVAS HLQKYRLYLS RLQKPNDPKS SFCGIKQPDF SQKDPPMTFA  300
HKSSSPVLQN TAANGSFGYT SSNLLVEGAA LETHEGDLNG IISFKSVTEP RSRKTLNGDV  360
PSPRKANNSQ IGFSHSLVLP ELDVNNISFE ANISQKHSWN REVPIMRMKQ LPKQEQKLYG  420
YTHLALLSQQ NKIQSESLQP SPSSINLGTS VGERDKACHL EIKPLHLEDK SDDFKHGFPT  480
APHISNLLQA DAENTSSQEF RPILRINTDL PCMKLQGYNQ HCTNTNASTW KPDQRNQIQG  540
NESTSYCSQQ ESHLGLLQDY LFIEDVELNN IASMNYHDPD MFADVPAHLL DKVRFTNDYL  600
CESTLEYPIM DQGLFIA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67710.1	1e-121	ARR-B family protein