PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026381344.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

TCP

Protein Properties

Length: 446aa MW: 48876.5 Da PI: 7.0866

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026381344.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	125.5	5.8e-39	80	262	2	116
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg....... 88 ++k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLlqqa+pa++++tgt++++a+++ + s +ss+s+ s++ XP_026381344.1 80 PPKRTSTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTsLNISLRSSGSTMSAPlrssyfn 174 789******************************************************************99988888888888666667888888 PP TCP 89 .....................................kaaksaakskksqksaasalnlakesr.......................a 116 ++++s+ + ++++++++++n +++s+ XP_026381344.1 175 pnfalttnpqlrirsewernidesssrllfpggldsnNSSTSTLLNFQNSSHNNNNNNNNNNSNvnqmlqakqelrdvpcldmsvdtD 262 8888999999999999999999999999999999886333333333333333333333333444333333333333555554444441 PP

Sequence ? help Back to Top
Protein Sequence Length: 446 aa Download sequence
MIMEGENGLR RPNFPLQLLE KKEEDICSSS GYPSLGISST ETNTTTINFR GASNNSSTIQ 60 TISENNLSSS TSSAVVKKPP PKRTSTKDRH TKVDGRGRRI RMPATCAARV FQLTRELGHK 120 SDGETIEWLL QQAEPAVIAA TGTGTIPANF TSLNISLRSS GSTMSAPLRS SYFNPNFALT 180 TNPQLRIRSE WERNIDESSS RLLFPGGLDS NNSSTSTLLN FQNSSHNNNN NNNNNNSNVN 240 QMLQAKQELR DVPCLDMSVD TDVGRKRRSE QHEEDPSSQQ QHQQNLHQFG NYFLQSSSTG 300 SIPASQIPSG GTVWMVQNPN TNNQVMSGDP IWTFPSVSNP TMYRGSMSSG LHFMNFPPPM 360 ALLSSHQQLG AGLLATSTTS NNTNGSGSTT THEGHLGMLA ALNAYRAWPN MGISDQHHHH 420 QATESDQSPH SHHEGNERHD SADHHS

Sequence ? help Back to Top

Protein Sequence Length: 446 aa Download sequence

MIMEGENGLR RPNFPLQLLE KKEEDICSSS GYPSLGISST ETNTTTINFR GASNNSSTIQ  60
TISENNLSSS TSSAVVKKPP PKRTSTKDRH TKVDGRGRRI RMPATCAARV FQLTRELGHK  120
SDGETIEWLL QQAEPAVIAA TGTGTIPANF TSLNISLRSS GSTMSAPLRS SYFNPNFALT  180
TNPQLRIRSE WERNIDESSS RLLFPGGLDS NNSSTSTLLN FQNSSHNNNN NNNNNNSNVN  240
QMLQAKQELR DVPCLDMSVD TDVGRKRRSE QHEEDPSSQQ QHQQNLHQFG NYFLQSSSTG  300
SIPASQIPSG GTVWMVQNPN TNNQVMSGDP IWTFPSVSNP TMYRGSMSSG LHFMNFPPPM  360
ALLSSHQQLG AGLLATSTTS NNTNGSGSTT THEGHLGMLA ALNAYRAWPN MGISDQHHHH  420
QATESDQSPH SHHEGNERHD SADHHS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G58100.1	1e-46	TCP family protein