PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026381214.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

bHLH

Protein Properties

Length: 413aa MW: 45856.6 Da PI: 7.8686

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026381214.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	51.2	2.3e-16	197	243	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn+ ErrRRdriN+++ L++l+P++ K +Ka++Le++veY+k Lq XP_026381214.1 197 VHNQSERRRRDRINQKIRALQKLVPNS-----SKTDKASMLEEVVEYLKRLQ 243 5***********************8.....7****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 413 aa Download sequence
MSSYEVAELT WENGQLSMHE LGGSVSSDPS KPLWARASGT LESIVHQATC HNPNPNMVAN 60 GRISTINTLS SGKNRTENAC DDEVQIVQQS AKKRSRSQSQ SECTLTRHNT MTANIDDLQV 120 EHSRCASATY LHDAKTTTTT TWTSSTSPNC SLNTKTMEDD VACASGPVTR DDQKQAKSQT 180 EAGQSQNSTR RSRVAAVHNQ SERRRRDRIN QKIRALQKLV PNSSKTDKAS MLEEVVEYLK 240 RLQAQIHDMM SINNRTTTMA MHPQMMMPLA LQQQQQQQHQ LQMSLLAASM GMGLGMGVNP 300 AVACATPSNA QIPPQPPFLM HPMMQAPPLS ASSDHHHIPN AMPVEPYYSF LAQSMNMDLY 360 NKMGAVYRQQ LYHHENMAAQ GNSKLLVPPK QTMHDAMIDT ICTYQSNNVQ PHD

Sequence ? help Back to Top

Protein Sequence Length: 413 aa Download sequence

MSSYEVAELT WENGQLSMHE LGGSVSSDPS KPLWARASGT LESIVHQATC HNPNPNMVAN  60
GRISTINTLS SGKNRTENAC DDEVQIVQQS AKKRSRSQSQ SECTLTRHNT MTANIDDLQV  120
EHSRCASATY LHDAKTTTTT TWTSSTSPNC SLNTKTMEDD VACASGPVTR DDQKQAKSQT  180
EAGQSQNSTR RSRVAAVHNQ SERRRRDRIN QKIRALQKLV PNSSKTDKAS MLEEVVEYLK  240
RLQAQIHDMM SINNRTTTMA MHPQMMMPLA LQQQQQQQHQ LQMSLLAASM GMGLGMGVNP  300
AVACATPSNA QIPPQPPFLM HPMMQAPPLS ASSDHHHIPN AMPVEPYYSF LAQSMNMDLY  360
NKMGAVYRQQ LYHHENMAAQ GNSKLLVPPK QTMHDAMIDT ICTYQSNNVQ PHD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	202	207	ERRRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00050.1	5e-26	bHLH family protein