PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026381086.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

bHLH

Protein Properties

Length: 556aa MW: 60788 Da PI: 9.0669

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026381086.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	54.1	2.7e-17	295	344	2	55
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r +h++ E+rRR++iN++f+ Lre++P + ++K +Ka+ L +++eYI+ Lq XP_026381086.1 295 RSKHSATEQRRRSKINDRFQILREIIPLN----DQKRDKASFLLEVIEYIQFLQ 344 889***********************9....9*****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 556 aa Download sequence
MELSQSCSFG TEGKKPTHDF LSLYNNHSSF QHQDPRPSQG IYLKTRDFLQ PLETVEKSIS 60 KGESSSIVET SSSSPVIIEK KAISQPRPPS SSSSASSIEH VLPGGIGTYT ISHIPNFGQQ 120 QVVPGQERPT SSSVIAPAAP TTSYEKKTDV VVNNRAAVSN SNSSYSGGSS FTLWGDSVVE 180 KKASSLAMMS KNGSSNGDHG QALRESVHNL GKWSSEQSLP SNPYILPSSF NSLPSSKGMS 240 QKNQSFMEMM KSAKSLHEDD DDDEIYLGKR DISSQKELTV KVDSKNIDQK ANTPRSKHSA 300 TEQRRRSKIN DRFQILREII PLNDQKRDKA SFLLEVIEYI QFLQEKVTKY EGPYQGWNQE 360 QTKLMPWQRN RNRTGENMAD HSRVVKNVPG PGMIFGGKFN DPNIPISSTL VGNAHNVVEN 420 DLTPGVSYKP MEPHLGRANK ALPLPVPIRP ELFTPAGDLA QPIQRPTLDE ANLATGAESH 480 LRQSRPCGVA ATDVLKERDE MAVEGGTISI SNVYSQGLLN NLTKALQSSG VDLSQASISV 540 QIDLGKQRLA ASKGAK

Sequence ? help Back to Top

Protein Sequence Length: 556 aa Download sequence

MELSQSCSFG TEGKKPTHDF LSLYNNHSSF QHQDPRPSQG IYLKTRDFLQ PLETVEKSIS  60
KGESSSIVET SSSSPVIIEK KAISQPRPPS SSSSASSIEH VLPGGIGTYT ISHIPNFGQQ  120
QVVPGQERPT SSSVIAPAAP TTSYEKKTDV VVNNRAAVSN SNSSYSGGSS FTLWGDSVVE  180
KKASSLAMMS KNGSSNGDHG QALRESVHNL GKWSSEQSLP SNPYILPSSF NSLPSSKGMS  240
QKNQSFMEMM KSAKSLHEDD DDDEIYLGKR DISSQKELTV KVDSKNIDQK ANTPRSKHSA  300
TEQRRRSKIN DRFQILREII PLNDQKRDKA SFLLEVIEYI QFLQEKVTKY EGPYQGWNQE  360
QTKLMPWQRN RNRTGENMAD HSRVVKNVPG PGMIFGGKFN DPNIPISSTL VGNAHNVVEN  420
DLTPGVSYKP MEPHLGRANK ALPLPVPIRP ELFTPAGDLA QPIQRPTLDE ANLATGAESH  480
LRQSRPCGVA ATDVLKERDE MAVEGGTISI SNVYSQGLLN NLTKALQSSG VDLSQASISV  540
QIDLGKQRLA ASKGAK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G08130.2	1e-76	bHLH family protein