PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026381060.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

bHLH

Protein Properties

Length: 544aa MW: 58508.9 Da PI: 5.8222

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026381060.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	27.2	7.1e-09	360	408	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq XP_026381060.1 360 NSHSLAERVRREKISERMKFLQDLVPGC----NKVTGKAVMLDEIINYVQSLQ 408 58***********************9....677***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 544 aa Download sequence
MDLSEKDKFG LEKRSGDPLN YQSPNMLPSN WQFNHGNQPL GLASTSDSME KGDLMMGGSS 60 ACSSGSMMDS FTGALWGHPS SSHNLSLGDN GSSGAVMGNL GWNPLNSVTK QGIYLPPTTG 120 MLHQSLSQFP ADSGFIERAA RYSCFNGGSF SDMLNPFNVP ENLSPYSKNG GAIQGSSDVL 180 FNGLKHIPGS QSQMNEANSA ELAKDVSVSV NRGITDGSPM KNDVKKGNFV RTPDETKQGV 240 GNSSNESDDA NCSGSAGGAV REDQSMLESA GREPSSSKGL APKKRRRDGQ VSEPDQGKSP 300 VQVTGEAANE DSDSKHKDDQ NPSPSGKGNK HGKDKDNSQT SDAPKEDYIH VRARRGQATN 360 SHSLAERVRR EKISERMKFL QDLVPGCNKV TGKAVMLDEI INYVQSLQRQ VEFLSMKLSA 420 VNPRLDLNLE SLLAKDILQS RGSPSSSMGF PQDMIMAQLH PSQPGLIQSG IPGMGNPSDA 480 LRRTINSQLM AMNAGYKEPN PQMPNPWDDE LNNVIQMSFD SNDPFNGQDL NAASLPPGHM 540 KVEL

Sequence ? help Back to Top

Protein Sequence Length: 544 aa Download sequence

MDLSEKDKFG LEKRSGDPLN YQSPNMLPSN WQFNHGNQPL GLASTSDSME KGDLMMGGSS  60
ACSSGSMMDS FTGALWGHPS SSHNLSLGDN GSSGAVMGNL GWNPLNSVTK QGIYLPPTTG  120
MLHQSLSQFP ADSGFIERAA RYSCFNGGSF SDMLNPFNVP ENLSPYSKNG GAIQGSSDVL  180
FNGLKHIPGS QSQMNEANSA ELAKDVSVSV NRGITDGSPM KNDVKKGNFV RTPDETKQGV  240
GNSSNESDDA NCSGSAGGAV REDQSMLESA GREPSSSKGL APKKRRRDGQ VSEPDQGKSP  300
VQVTGEAANE DSDSKHKDDQ NPSPSGKGNK HGKDKDNSQT SDAPKEDYIH VRARRGQATN  360
SHSLAERVRR EKISERMKFL QDLVPGCNKV TGKAVMLDEI INYVQSLQRQ VEFLSMKLSA  420
VNPRLDLNLE SLLAKDILQS RGSPSSSMGF PQDMIMAQLH PSQPGLIQSG IPGMGNPSDA  480
LRRTINSQLM AMNAGYKEPN PQMPNPWDDE LNNVIQMSFD SNDPFNGQDL NAASLPPGHM  540
KVEL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68920.3	1e-110	bHLH family protein