PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026380589.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | ARR-B | ||||||||
Protein Properties | Length: 676aa MW: 73458.2 Da PI: 6.0039 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 89.5 | 3e-28 | 237 | 290 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++W+ eLH++Fv+av+qL G++kA+Pk+ilelm+v+gLt+e+v+SHLQk+Rl XP_026380589.1 237 KPRVVWSVELHQQFVSAVNQL-GIDKAVPKRILELMNVPGLTRENVASHLQKFRL 290 79*******************.********************************8 PP | |||||||
2 | Myb_DNA-binding | 40.2 | 7.8e-13 | 239 | 289 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ e+++++v av+qlG + +k+I + m+ g+t++++ s++qk++ XP_026380589.1 239 RVVWSVELHQQFVSAVNQLGIDkaVPKRILELMNvPGLTRENVASHLQKFR 289 678**********************************************97 PP | |||||||
3 | Response_reg | 75 | 2.9e-25 | 51 | 159 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl+vdD+ + +++l+q+l++ y v+++ +++ al+ll+e++ +D+++ D+ mp+mdG++ll+ e++lp+i+++a g + + + +k G XP_026380589.1 51 VLVVDDDATCLRILEQMLRRCMY-LVTTCCQATVALNLLRERKgcFDVVISDVHMPDMDGFKLLELVGL-EMDLPVIMMSADGRTSAVMRGIKHG 143 89*********************.****************************************87754.558********************** PP ESEEEESS--HHHHHH CS Response_reg 94 akdflsKpfdpeelvk 109 a d+l Kp+ eel + XP_026380589.1 144 ACDYLIKPVRFEELKN 159 *************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 676 aa Download sequence |
MAAVQKYQVV SSMSTSGSNY GSSSISNTNK VVVDSGGGGG VSDQFPVGLR VLVVDDDATC 60 LRILEQMLRR CMYLVTTCCQ ATVALNLLRE RKGCFDVVIS DVHMPDMDGF KLLELVGLEM 120 DLPVIMMSAD GRTSAVMRGI KHGACDYLIK PVRFEELKNI WQHVVRKKYG GSKEPEQSGS 180 VEESGDRYKQ GGDDADYASS ANEGTDGSWK VQKKRKDTKD EEDDGEYDND DPSAAKKPRV 240 VWSVELHQQF VSAVNQLGID KAVPKRILEL MNVPGLTREN VASHLQKFRL YLKRLSGVAH 300 QQGGVSSPFY SPVDSNPKLG SLGRLDIQAL AASGQIPAQT LAALHAEVLG RPTGTLVLSD 360 MDKPVLLQSS LQSHKVLPGE RRASYGHPIV KSSIPKQFSQ SHLPMEDFPS MFGSWPSNNM 420 STVNSLGNHG DLNTQNSNML MQMFQQQQQS GLPETSHGTN VQPSCVVVPS QSPTSYQAVN 480 ASIHLNQNSA FSSSPVIDYN LLSSQSNSVS VGLGQQISDV DHFKNNGVLN GYSLPVSVSQ 540 SMSFSPPVQA DNNASWQVQS PGMGFSTTSK LSGLAPNMNE IQSSIYIPTN SDSSSQGRTM 600 NLGFVNRGTS YPSRFAVDDF DSSFDNVNSV RTSADNYGIG DRVKQETNLE FAESDNVTLP 660 VLQHYPPNDL MSVLSK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G16857.1 | 1e-122 | ARR-B family protein |