PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026380582.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

NF-X1

Protein Properties

Length: 1156aa MW: 125157 Da PI: 8.1933

Description

NF-X1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026380582.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-NF-X1	21.2	6.4e-07	417	434	1	18
zf-NF-X1 1 CGkHkCqklCHeGpCppC 18 CG+H+C++ CH+G+C++C XP_026380582.1 417 CGNHTCGEVCHPGQCGEC 434 ****************** PP
2	zf-NF-X1	18.5	4.2e-06	569	587	1	19
zf-NF-X1 1 CGkHkCqklCHeGpCppCp 19 CG+H+C++lCH G CppC XP_026380582.1 569 CGQHSCESLCHSGHCPPCL 587 ******************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 1156 aa Download sequence
MSFQVRNDNR REGSRIPVRN NNNNNRQWIP RGGAVIGSGG AGGSGSSAIL ETPPPPPSSS 60 YFNNSIPNGG RYGGNFNNNN YNGNPTGGGG YGGSGSSYYN VNNSVPSGRG GYGGGGSFSY 120 NPVQFENRSQ GNFTHQHHQR SNVSRPVNNN PRKEKVEKPA QVSKSLNSNL PQLVQEIQDK 180 LTKGAVECMI CYDMVRRSAP IWSCSSCYSI FHMNCIKKWA RAPTSVDLSA EKNQGLNWRC 240 PGCQSVQLLT SKEIRYLCFC GKRPDPPSDL YLTPHSCGEH CGKPLEKQMQ NGDDEDCCPH 300 ACVLQCHPGP CPPCKAFAPA RRCPCGKKMI TTRCSDRKSV LTCGQLCHKV LECGRHHCKK 360 ICHTGPCESC EVPMDASCFC NKKKEVVLCG EMTVKGELIG GGGVFSCNSI CSKTLVCGNH 420 TCGEVCHPGQ CGECELMPGN IKSCPCGKTP LQKERVSCLS PIPSCSNTCD KTLPCQIHRC 480 KETCHVGDCS PCVVTVNQKC RCGSSSRFAE CYKKEKDTFT CEKSCGRKKN CGRHRCSERC 540 CPLSNSNTRY SGDWDPHLCS MICGKKLRCG QHSCESLCHS GHCPPCLETI FTDLTCACGK 600 TSIPPPQPCG TPAPSCQQLC SVPQPCGHAS THGCHFGDCP PCSFPVAKEC TGGHVILRNI 660 PCGSKEIRCN QLCGKPRQCG MHACGRTCHQ PPCDTSCMST SGSRSTCGQV CGAPRRDCKH 720 TCASSCHPSS PCPERRCEFP VTITCLCGRI SATVPCDAGG NSGGFASDTV FEAQLIHKLP 780 VPLKPVEANG NKVPLGQRKL VCDDECVKME RQRKLADAFK VPLLNLEALH LGDQSVISEQ 840 LQDLFRREPK WVLSIEERCK FLVLGKGKGN TSNGLRVHVF CAMVKEKRDA VRQIAGRWKL 900 SVHSAGWEPK RFLVVHVTTK SKAPARILGV KGSSVPLNAS NPPAFDPLVD MDQRLVVALL 960 DLPRESNVNA LVLRFGGECE LVWLDEFNAL AIFSDPGRAA TALRRLDHGS AYHGAAVVIA 1020 PTITNVWGTS KEGGSVGAPK ANSWKKAVVQ EASWGEDSWG VDQNWINNPA DVQNTVWRGK 1080 ETPITASINR YDVLDQDSIS KSSAVLSSGG VERRPGNYQI GSSSTSTEPK QEATAGDKSD 1140 KEVVAEVADD WEEACE

Sequence ? help Back to Top

Protein Sequence Length: 1156 aa Download sequence

MSFQVRNDNR REGSRIPVRN NNNNNRQWIP RGGAVIGSGG AGGSGSSAIL ETPPPPPSSS  60
YFNNSIPNGG RYGGNFNNNN YNGNPTGGGG YGGSGSSYYN VNNSVPSGRG GYGGGGSFSY  120
NPVQFENRSQ GNFTHQHHQR SNVSRPVNNN PRKEKVEKPA QVSKSLNSNL PQLVQEIQDK  180
LTKGAVECMI CYDMVRRSAP IWSCSSCYSI FHMNCIKKWA RAPTSVDLSA EKNQGLNWRC  240
PGCQSVQLLT SKEIRYLCFC GKRPDPPSDL YLTPHSCGEH CGKPLEKQMQ NGDDEDCCPH  300
ACVLQCHPGP CPPCKAFAPA RRCPCGKKMI TTRCSDRKSV LTCGQLCHKV LECGRHHCKK  360
ICHTGPCESC EVPMDASCFC NKKKEVVLCG EMTVKGELIG GGGVFSCNSI CSKTLVCGNH  420
TCGEVCHPGQ CGECELMPGN IKSCPCGKTP LQKERVSCLS PIPSCSNTCD KTLPCQIHRC  480
KETCHVGDCS PCVVTVNQKC RCGSSSRFAE CYKKEKDTFT CEKSCGRKKN CGRHRCSERC  540
CPLSNSNTRY SGDWDPHLCS MICGKKLRCG QHSCESLCHS GHCPPCLETI FTDLTCACGK  600
TSIPPPQPCG TPAPSCQQLC SVPQPCGHAS THGCHFGDCP PCSFPVAKEC TGGHVILRNI  660
PCGSKEIRCN QLCGKPRQCG MHACGRTCHQ PPCDTSCMST SGSRSTCGQV CGAPRRDCKH  720
TCASSCHPSS PCPERRCEFP VTITCLCGRI SATVPCDAGG NSGGFASDTV FEAQLIHKLP  780
VPLKPVEANG NKVPLGQRKL VCDDECVKME RQRKLADAFK VPLLNLEALH LGDQSVISEQ  840
LQDLFRREPK WVLSIEERCK FLVLGKGKGN TSNGLRVHVF CAMVKEKRDA VRQIAGRWKL  900
SVHSAGWEPK RFLVVHVTTK SKAPARILGV KGSSVPLNAS NPPAFDPLVD MDQRLVVALL  960
DLPRESNVNA LVLRFGGECE LVWLDEFNAL AIFSDPGRAA TALRRLDHGS AYHGAAVVIA  1020
PTITNVWGTS KEGGSVGAPK ANSWKKAVVQ EASWGEDSWG VDQNWINNPA DVQNTVWRGK  1080
ETPITASINR YDVLDQDSIS KSSAVLSSGG VERRPGNYQI GSSSTSTEPK QEATAGDKSD  1140
KEVVAEVADD WEEACE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10170.1	0.0	NF-X1 family protein