PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026380236.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 219aa MW: 25695.1 Da PI: 9.6645 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 93.2 | 1.2e-29 | 10 | 59 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 rien + rqvtfskRrng+lKKA+ELSvLC+aeva+i+fs++gklye+ss XP_026380236.1 10 RIENATSRQVTFSKRRNGLLKKAFELSVLCEAEVALIVFSPRGKLYEFSS 59 8***********************************************96 PP | |||||||
2 | K-box | 81.9 | 1.5e-27 | 84 | 176 | 5 | 97 |
K-box 5 sgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkk 97 ++k+ e++++++l+ e+a+L k+ienL+ ++R+l+Ge+Les+s+ eLq e+qLeksl +iR++Kn+l++e+ie+l++kek+l een+ L +k XP_026380236.1 84 NSKAIEQQNSQQLKYEAANLAKKIENLEASKRKLMGEGLESCSIDELQTAENQLEKSLLNIRARKNQLYREKIEQLKQKEKQLLEENEVLCQK 176 3344999**********************************************************************************9988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 219 aa Download sequence |
MVRGKTEMRR IENATSRQVT FSKRRNGLLK KAFELSVLCE AEVALIVFSP RGKLYEFSSA 60 TSMRKTIERY QKYNKNVQVN YSSNSKAIEQ QNSQQLKYEA ANLAKKIENL EASKRKLMGE 120 GLESCSIDEL QTAENQLEKS LLNIRARKNQ LYREKIEQLK QKEKQLLEEN EVLCQKCGPR 180 QWEQQNQQNH QQREIIPYET SPDSHEVETE LQIGRPERR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G11880.1 | 4e-69 | MIKC_MADS family protein |