PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026380055.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family HD-ZIP
Protein Properties Length: 881aa    MW: 95063.9 Da    PI: 6.3317
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026380055.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox63.92.2e-20150205156
                     TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     +++ +++t++q++eLe+lF+++++p++++r eL+++l L+ rqVk+WFqNrR+++k
  XP_026380055.1 150 KKRYHRHTPQQIQELEALFKECPHPDEKQRNELSRRLVLEARQVKFWFQNRRTQMK 205
                     688999***********************************************999 PP
2START184.75e-583725952206
                     HHHHHHHHHHHHHHHC-TT-EEEE.....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEE CS
           START   2 laeeaaqelvkkalaeepgWvkss.....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetl 82 
                     la +a++elv++a+ +ep+W  ss     e  n+de+++ f++  +     + +ea r++gvv+ +++ lve+l+d k ++  +++    ++ t+
  XP_026380055.1 372 LAMAAMEELVRMAQTNEPVWIPSSfeggkETFNRDEYTRMFAPCIGskpngFVTEATRETGVVIVNSVALVETLMDAK-RYVDMFPcviaRCNTT 465
                     57799**********************99999*********9988899999***************************.99999999999***** PP

                     EEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-E CS
           START  83 evissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehv 170
                     +vissg      galqlm ae+q+lsplv  R++ f+R+++q+ +g+w++vd+Svd +q+++ +     +++lpSg++i++++ng++kvtwveh+
  XP_026380055.1 466 DVISSGvggtrnGALQLMHAEFQVLSPLVQiREVNFLRFCKQHAEGVWAVVDISVDANQENS-DTYTYLSRRLPSGCVIQDMPNGYCKVTWVEHA 559
                     *************************************************************9.56666679************************ PP

                     E--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
           START 171 dlkgrlphwllrslvksglaegaktwvatlqrqcek 206
                     +++++++h ++++lv+ gl +ga++wvatlqrqce+
  XP_026380055.1 560 EYDENSIHRIYQPLVNAGLGFGAQKWVATLQRQCEC 595
                     **********************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 881 aa     Download sequence    
MSSFGGFFDN SSTTTTATTT TTTAGGGGGG GGGVRVVSDI PLNNMPTGVI SRSRVVNHNH  60
HHHHPYHKPA AVFKSPGLSL GLQTNNMDGH GGGGGGDRFG ENLDGGSGLL GGGARLLDGR  120
ELDEYESRSG SDNMDGANSD DQDTDKPPRK KRYHRHTPQQ IQELEALFKE CPHPDEKQRN  180
ELSRRLVLEA RQVKFWFQNR RTQMKTQIER HENSILRQEN DKLRAENMNV REAMRNPMCN  240
NCGGAAVLGD VSLEEQHLRV ENARLKEELD RVCALAGKFL GRPVSSIGDP LPPSMQISAG  300
LDLAVGINGG FGGMNHGMSG VNPNLLMGNN NNQFRGSGGS GGMPAMSMVP HQQQSISSGV  360
DRSVENSMYL DLAMAAMEEL VRMAQTNEPV WIPSSFEGGK ETFNRDEYTR MFAPCIGSKP  420
NGFVTEATRE TGVVIVNSVA LVETLMDAKR YVDMFPCVIA RCNTTDVISS GVGGTRNGAL  480
QLMHAEFQVL SPLVQIREVN FLRFCKQHAE GVWAVVDISV DANQENSDTY TYLSRRLPSG  540
CVIQDMPNGY CKVTWVEHAE YDENSIHRIY QPLVNAGLGF GAQKWVATLQ RQCECIAILM  600
SNMPIRDQTG ITQSGRKSML KLAQRMTQNF CAGVCPSSVH KWNRLSAGNV DADVRVMTRK  660
SIDDPGEPPG VVLSAATSVW LPISPQKLFD FLRDERLRSE WDILSNGGPM QQMSHINKGQ  720
DPGNCVSLLR AGAMNASQSS MLILQETCID ASGSLVVYAP VDIPAMHVVM SGGDSAYVAL  780
LPSGFSIVPD GGPHRQSISN CADPPNGSNN NDGSDGGGSS SQQLTSDAAG PGASGSLLTV  840
AFQILVNSLP TAKLTVESVE TVNNLISCTV QKIKAALNCE N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00730.10.0HD-ZIP family protein