PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026379814.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family MYB_related
Protein Properties Length: 314aa    MW: 35087.2 Da    PI: 7.726
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026379814.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding42.71.3e-1359103147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      r +WT++E++++ +a +++  + Wk+I + +g ++t  q++s+ qky
   XP_026379814.1  59 RESWTEQEHDKFFEALQLFDRD-WKKIEAFVG-TKTVIQIRSHAQKY 103
                      789*****************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    
MVSMNFDDQN HLPPQFEMSG LPAELGGGGG GSISTTTAAE SYEDSLRKIR KPYTITKSRE  60
SWTEQEHDKF FEALQLFDRD WKKIEAFVGT KTVIQIRSHA QKYFQKVQKN GTSEHLPPPR  120
PKRKAVHPYP QKAAKNVPML PQTTGVCQSS SNLLESRSVL RPDPSVLLKT GPAVSSWPQL  180
SNDDTESARL IASNNCYSSS NNTPGSYPTR ETTGRGNHGP PLRAIPDFAQ VYSFIGSVFD  240
PNTSNHLEKL KEMNPIDVDT VLLLMRNLSM NLSSPDFEDQ RRLLSSYDVD SGKTQHENEV  300
PFMNADESKN SRGR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52660.27e-95MYB_related family protein