PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026379545.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family C3H
Protein Properties Length: 442aa    MW: 48855.4 Da    PI: 8.1323
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026379545.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH261.6e-08111132426
                     ---SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH   4 elCrffartGtCkyGdrCkFaHg 26 
                      +C++++   +C++G++CkF H+
  XP_026379545.1 111 TICKYWMD-NECSFGESCKFLHP 132
                     68******.*************8 PP

Sequence ? help Back to Top
Protein Sequence    Length: 442 aa     Download sequence    
FNYRRSKSVK LWDFDSRKRI HNRPAGERGV PTKDIVCKYW KAGRCTSNPC QYRHSELPQS  60
SSNIRIQQPS DQGNFSGSCS FQRRKQNTYN RAPPSYWGRD HDQGGAVNGK TICKYWMDNE  120
CSFGESCKFL HPWFAGDDFT MLAQLAGHEK EKVISGIALP TGTNKLKLYS GSKDGTVRVW  180
DCQTGHCSAV INLGSEVGCV ISEGPWVFVG IKNCVKAWNT QTNRELSLGG PSGQVYALVV  240
GNEMLFAATQ DGSILVWKFV AATNGFEPAA ALKGHGASVL TLVIGANRLY SGSMDNTIRV  300
WELETLQCIH TLTDHTSVVM SVLCWDQYLL SCSLDKTMKV WALTESGKLE VIYNREEHGL  360
LALSGMPDAQ GKPVLICSCN DNTARLYDLP LFTEGGKIYA KEEIRAIQTA PGGLFFTGDG  420
NGDLKVWKWT EQSPPAAATI HQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25440.11e-172C3H family protein