PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026379380.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

NAC

Protein Properties

Length: 386aa MW: 43272.3 Da PI: 6.6129

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026379380.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	103.8	2.3e-32	57	198	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkk......leleev.ikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra........tks 80 p+G++F+Ptd el+ e+L++k++ + ++++ i++ +i++++P++Lp +k++ ++++fF++++k+yatg+rk+r ++ XP_026379380.1 57 PAGVKFDPTDAELL-EHLAAKLSPGNlkphtfIDEFIPsIESQeGICYTHPKNLP-GAKKDGSSVHFFHRTSKAYATGHRKRRRirgelssaEEH 149 89**********.99*99995655443332233555547******.55677899***************757777765558 PP NAM 81 gyWkatgkdkevlskkgelvglkktLvfykg..rapkgektdWvmheyrl 128 +W++tgk+k+v++ +g ++g kk++v+yk + +k+ k++Wvmh+y+l XP_026379380.1 150 VRWHKTGKTKPVVH-NGIQKGFKKIMVLYKSsiKGSKPDKSNWVMHQYHL 198 99********.99********6434677777*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 386 aa Download sequence
MVRRSWLIDS KGIASKVKNA PNFSSYQIKD CGASRECPNC LHRIDNSDVA VEWPGFPAGV 60 KFDPTDAELL EHLAAKLSPG NLKPHTFIDE FIPSIESQEG ICYTHPKNLP GAKKDGSSVH 120 FFHRTSKAYA TGHRKRRRIR GELSSAEEHV RWHKTGKTKP VVHNGIQKGF KKIMVLYKSS 180 IKGSKPDKSN WVMHQYHLGT NEEELEGEFV VSKIFYQQPP KHTDTGDIQT TPSTPNTNTP 240 NPPRPEKRAK LNELDKENIE YPSVHQDVEV SSKSLQLPAE VVCFGVERST AAWWAGESQA 300 VENPDPDGID ISLLCHENHE ILNESGTKKV SCLSDWDRNR NDNGDLSTAF GLADLDSLAL 360 GTPPEFEPGD WQFGSQESFT SWFDRL

Sequence ? help Back to Top

Protein Sequence Length: 386 aa Download sequence

MVRRSWLIDS KGIASKVKNA PNFSSYQIKD CGASRECPNC LHRIDNSDVA VEWPGFPAGV  60
KFDPTDAELL EHLAAKLSPG NLKPHTFIDE FIPSIESQEG ICYTHPKNLP GAKKDGSSVH  120
FFHRTSKAYA TGHRKRRRIR GELSSAEEHV RWHKTGKTKP VVHNGIQKGF KKIMVLYKSS  180
IKGSKPDKSN WVMHQYHLGT NEEELEGEFV VSKIFYQQPP KHTDTGDIQT TPSTPNTNTP  240
NPPRPEKRAK LNELDKENIE YPSVHQDVEV SSKSLQLPAE VVCFGVERST AAWWAGESQA  300
VENPDPDGID ISLLCHENHE ILNESGTKKV SCLSDWDRNR NDNGDLSTAF GLADLDSLAL  360
GTPPEFEPGD WQFGSQESFT SWFDRL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	134	138	RKRRR
2	135	139	KRRRI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01600.1	3e-92	NAC family protein