PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026379348.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

NAC

Protein Properties

Length: 397aa MW: 45081.7 Da PI: 6.6533

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026379348.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	168	3.2e-52	14	141	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 + pGfrFhPtdeelv +yLk+k+++++l++ e ik++diyk++PwdLpk +++ekewyf+++rd+ky+++ r+nr+t +g+Wkatg+d++++s+ XP_026379348.1 14 MLPGFRFHPTDEELVGFYLKRKIQQRPLSI-ELIKQLDIYKYDPWDLPKLSTTGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSS 107 579*************************.89***********87788999**********************************9 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128 +++ +glkk+Lvfy+gra kg+ktdW+mhe+rl XP_026379348.1 108 eGTKCIGLKKSLVFYTGRAAKGVKTDWMMHEFRL 141 56667*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 397 aa Download sequence
MDDKYDSDKL DDIMLPGFRF HPTDEELVGF YLKRKIQQRP LSIELIKQLD IYKYDPWDLP 60 KLSTTGEKEW YFYCPRDRKY RNSARPNRVT GAGFWKATGT DRPIYSSEGT KCIGLKKSLV 120 FYTGRAAKGV KTDWMMHEFR LPSLTNPATP KRFTDKTLPV NDSWAICRIF KKTNSMAQRA 180 LSHSWVSPIP ELNGSQIPNK NTNYTHFRKE SMSCISEAGS TIQFSCNNND LQQCSPTSFS 240 PINIPSYKPD INPTMCKQSQ HPTFNGDLSS NFMFSSLDMA GNAKYTADIA SMLLNFPPAL 300 LGDTDDCPDD INFSGTQQEY GGFSSMLPQE MQGNISFGED EEAWLRRTTN TLSANDQWGT 360 VRSVDFPFNL PISNLTWDSL PCPSDISTSY STNKCYT

Sequence ? help Back to Top

Protein Sequence Length: 397 aa Download sequence

MDDKYDSDKL DDIMLPGFRF HPTDEELVGF YLKRKIQQRP LSIELIKQLD IYKYDPWDLP  60
KLSTTGEKEW YFYCPRDRKY RNSARPNRVT GAGFWKATGT DRPIYSSEGT KCIGLKKSLV  120
FYTGRAAKGV KTDWMMHEFR LPSLTNPATP KRFTDKTLPV NDSWAICRIF KKTNSMAQRA  180
LSHSWVSPIP ELNGSQIPNK NTNYTHFRKE SMSCISEAGS TIQFSCNNND LQQCSPTSFS  240
PINIPSYKPD INPTMCKQSQ HPTFNGDLSS NFMFSSLDMA GNAKYTADIA SMLLNFPPAL  300
LGDTDDCPDD INFSGTQQEY GGFSSMLPQE MQGNISFGED EEAWLRRTTN TLSANDQWGT  360
VRSVDFPFNL PISNLTWDSL PCPSDISTSY STNKCYT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G26870.1	1e-104	NAC family protein