PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026379346.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

NAC

Protein Properties

Length: 398aa MW: 45210.8 Da PI: 6.3632

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026379346.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	167.6	4.3e-52	14	142	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 + pGfrFhPtdeelv +yLk+k+++++l++ e ik++diyk++PwdLpk +++ekewyf+++rd+ky+++ r+nr+t +g+Wkatg+d++++s XP_026379346.1 14 MLPGFRFHPTDEELVGFYLKRKIQQRPLSI-ELIKQLDIYKYDPWDLPKeLSTTGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYS 107 579*************************.89***********624455888********************************** PP NAM 95 k.kgelvglkktLvfykgrapkgektdWvmheyrl 128 + +++ +glkk+Lvfy+gra kg+ktdW+mhe+rl XP_026379346.1 108 SeGTKCIGLKKSLVFYTGRAAKGVKTDWMMHEFRL 142 956667*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 398 aa Download sequence
MDDKYDSDKL DDIMLPGFRF HPTDEELVGF YLKRKIQQRP LSIELIKQLD IYKYDPWDLP 60 KELSTTGEKE WYFYCPRDRK YRNSARPNRV TGAGFWKATG TDRPIYSSEG TKCIGLKKSL 120 VFYTGRAAKG VKTDWMMHEF RLPSLTNPAT PKRFTDKTLP VNDSWAICRI FKKTNSMAQR 180 ALSHSWVSPI PELNGSQIPN KNTNYTHFRK ESMSCISEAG STIQFSCNNN DLQQCSPTSF 240 SPINIPSYKP DINPTMCKQS QHPTFNGDLS SNFMFSSLDM AGNAKYTADI ASMLLNFPPA 300 LLGDTDDCPD DINFSGTQQE YGGFSSMLPQ EMQGNISFGE DEEAWLRRTT NTLSANDQWG 360 TVRSVDFPFN LPISNLTWDS LPCPSDISTS YSTNKCYT

Sequence ? help Back to Top

Protein Sequence Length: 398 aa Download sequence

MDDKYDSDKL DDIMLPGFRF HPTDEELVGF YLKRKIQQRP LSIELIKQLD IYKYDPWDLP  60
KELSTTGEKE WYFYCPRDRK YRNSARPNRV TGAGFWKATG TDRPIYSSEG TKCIGLKKSL  120
VFYTGRAAKG VKTDWMMHEF RLPSLTNPAT PKRFTDKTLP VNDSWAICRI FKKTNSMAQR  180
ALSHSWVSPI PELNGSQIPN KNTNYTHFRK ESMSCISEAG STIQFSCNNN DLQQCSPTSF  240
SPINIPSYKP DINPTMCKQS QHPTFNGDLS SNFMFSSLDM AGNAKYTADI ASMLLNFPPA  300
LLGDTDDCPD DINFSGTQQE YGGFSSMLPQ EMQGNISFGE DEEAWLRRTT NTLSANDQWG  360
TVRSVDFPFN LPISNLTWDS LPCPSDISTS YSTNKCYT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G26870.1	1e-102	NAC family protein