PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026378792.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family LFY
Protein Properties Length: 438aa    MW: 49188.3 Da    PI: 8.0729
Description LFY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026378792.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FLO_LFY553.85.5e-16984114384
         FLO_LFY   4 eafsaslfkwdpraaa......aapparlleeaavseap......leaaaaaaarklr.............................eleelfka 57 
                     +a+sa+++kwdpr         ++pp + ++++++++++      l++         +                             +le++f+ 
  XP_026378792.1   8 HALSANIYKWDPRGPPplpphtQPPPPQPQPTTTMVQHNnnihaaLQS---------SpgsssysalmrpnsstnyrdhhdhhqhqlGLEDFFQP 93 
                     457999*****9877655555433333333333222222122222222.........0222334445558888888899999***99******** PP

         FLO_LFY  58 yGvryltvakiaelGftvstLvdmkdeelddlmkslseifrldllvGeryGikaavraerr.rleeeeaek.krrkllsedeet.aldalsqegl 149
                     yG+ry tvaki+elGftv+tL++m+de+ld++m+ +s ++r++llvGeryGikaav ae+r r ++++a+  +r +l+++d++t aldalsqegl
  XP_026378792.1  94 YGIRYHTVAKISELGFTVKTLLEMRDEDLDEMMNNVSLLYRWELLVGERYGIKAAVHAEQRnRSRDHDADLiRRGQLITNDSATnALDALSQEGL 188
                     ***********************************************************87355566655415566777777666********** PP

         FLO_LFY 150 seepvqeekeaagsggeglgeaelvaaeekkseeekkkaskkkqkrkkkkelkseededeeeeededeegsgedgeerqrehPfivtepgevarg 244
                     see+vq+eke +gsgg+     e+v ++  + +++kkk+   +q+r+k   +   ++ed+e e + ++ g+g   +er+rehPfivtepgevarg
  XP_026378792.1 189 SEEAVQQEKEVMGSGGAL----ESVPTK--ELKKKKKKQ---QQRRRK--GVL--SNEDDEGEGSGSDGGGGGVITERHREHPFIVTEPGEVARG 270
                     **************9887....344333..222333333...222222..222..234444455555666666788******************* PP

         FLO_LFY 245 kknGLDYLfdLyeqCrefLlqvqkiakerGekcPtkvtnqvfryakkagasyinkPkmrhYvhCYalhcLdeeasnalrrafkergenvGawrqa 339
                     kknGLDYLf+LyeqCr+fL++vq+ akerGekcPtkvtnqvfryakkagasyinkPkmrhYvhCYalhcLd e snalrrafkergenvGawrqa
  XP_026378792.1 271 KKNGLDYLFHLYEQCRDFLIEVQNNAKERGEKCPTKVTNQVFRYAKKAGASYINKPKMRHYVHCYALHCLDPEGSNALRRAFKERGENVGAWRQA 365
                     *********************************************************************************************** PP

         FLO_LFY 340 cykplvaiaarqgw.didavfnahprLsiWYvPtkLrqLChlersk 384
                     cy+plv++aa qg+ dida+f+ahprL iWYvPtkLr+LCh++r+ 
  XP_026378792.1 366 CYEPLVKMAALQGHcDIDAIFEAHPRLCIWYVPTKLRHLCHAQRQI 411
                     *********988744****************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 438 aa     Download sequence    
MDPHDVYHAL SANIYKWDPR GPPPLPPHTQ PPPPQPQPTT TMVQHNNNIH AALQSSPGSS  60
SYSALMRPNS STNYRDHHDH HQHQLGLEDF FQPYGIRYHT VAKISELGFT VKTLLEMRDE  120
DLDEMMNNVS LLYRWELLVG ERYGIKAAVH AEQRNRSRDH DADLIRRGQL ITNDSATNAL  180
DALSQEGLSE EAVQQEKEVM GSGGALESVP TKELKKKKKK QQQRRRKGVL SNEDDEGEGS  240
GSDGGGGGVI TERHREHPFI VTEPGEVARG KKNGLDYLFH LYEQCRDFLI EVQNNAKERG  300
EKCPTKVTNQ VFRYAKKAGA SYINKPKMRH YVHCYALHCL DPEGSNALRR AFKERGENVG  360
AWRQACYEPL VKMAALQGHC DIDAIFEAHP RLCIWYVPTK LRHLCHAQRQ ITTSASTATG  420
TTSAPVVITG PRPAGPSF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61850.12e-96LFY family protein