PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026378061.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family C3H
Protein Properties Length: 326aa    MW: 37561 Da    PI: 9.4887
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026378061.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH22.81.7e-07159179425
                     ---SGGGGTS--TTTTT-SS-S CS
         zf-CCCH   4 elCrffartGtCkyGdrCkFaH 25 
                     ++Crf+ar G+Ck+G+ C++ H
  XP_026378061.1 159 PPCRFYAR-GICKRGAECPYRH 179
                     79******.*********9977 PP
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    
MAHRFSRDPE DDGWERSDLP ILCQSCLRRY VRMTRADYDD ECKVCTRPFT VFRWRPGQDA  60
RYKKTMICRT CSKIKHVCQV CLLDLDYGLP VQVRDTASST YSGDYVPKSD VNREYYAEEY  120
DRKARLGIDY ESSYGKAQPS DTIRKLQRTA PYYQRNRAPP CRFYARGICK RGAECPYRHE  180
ILVAGELSRQ NIRDRYYGVN DPVAAKLLRK AGEMPSLASR QQATAYRGSP PSYYNSPHPQ  240
SRTSYPSMNP QRMGAQVPYQ EGFNNRPSGS TDAQQRKHYS YQNSSPPSQG NYPPYHPPYV  300
PSPSPDQQYH HQRTGLRSPP AMGAQS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1121127DRKARLG