PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026377647.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | ERF | ||||||||
Protein Properties | Length: 258aa MW: 28844.3 Da PI: 8.3696 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 36.6 | 1.1e-11 | 53 | 101 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56 + kGV + +grW A+I+ + +r+++g+f +++eA ka++aa+ kl+ e XP_026377647.1 53 KLKGVVSQP-NGRWGAQIYS------NhQRIWIGTFKSKYEAGKAYDAAAIKLRSE 101 569998788.8******999......44*************************975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 258 aa Download sequence |
MEDQGMLSME SNITTLNGVV GEEGCSDSHS NNSPGGSSNN HQRKDISVAS SAKLKGVVSQ 60 PNGRWGAQIY SNHQRIWIGT FKSKYEAGKA YDAAAIKLRS EDSHRNYPSN STITSLELDF 120 QKPLTAYEVL TMLKDGSYYT KLYEFVNSRS LKLDKEPGLS LSSESAKDGA VSYQQLSQKE 180 QTPSDVGMLN KPEIPKIFDD WYFVEVSKEE KDAGVIDDTQ LSFFGRGWNR LVKDKKLKAT 240 MWIHFISASV VKSIKRFT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G50680.1 | 4e-47 | RAV family protein |