PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026377482.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

TCP

Protein Properties

Length: 479aa MW: 52442.6 Da PI: 7.9648

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026377482.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	103.5	3.5e-32	56	226	3	137
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.............................sss 68 g+kdrhsk++T +g+RdRRvRls+++a++++dLqd+LG+ ++sk ++WLl++ak +i+el+ + XP_026377482.1 56 GGKDRHSKVCTVRGLRDRRVRLSVPTAIQLYDLQDRLGLNQPSKVVDWLLNAAKDEIDELPPLqippgafglypqpmivspqevtdhmqtslA-- 148 78*************************************************************666666666555554444333332222220.. PP TCP 69 saseceaesssssasnsssg...........................kaaksaakskksqksaasalnlak.esrakarararertrekmriknk 135 + ++ + + ++ ++++s+++ +nl+ ++k+++ +e t++++r+++ XP_026377482.1 149 -------------------SlvdsykdgdatnllrsdkagfnmndnsEKHEGSRQTTDATTSESKYWNLNSpMRSSKSKEVVHETTTSDQRNNWM 224 ...................1222222333344444444455555443333333345555555555666666444456666667777777777766 PP TCP 136 ln 137 n XP_026377482.1 225 MN 226 54 PP

Sequence ? help Back to Top
Protein Sequence Length: 479 aa Download sequence
MQYKMITNSR GKDLTTKQEG NDNNDKITKG PAASTSRSSW SGLKDPRVVR VSRTFGGKDR 60 HSKVCTVRGL RDRRVRLSVP TAIQLYDLQD RLGLNQPSKV VDWLLNAAKD EIDELPPLQI 120 PPGAFGLYPQ PMIVSPQEVT DHMQTSLASL VDSYKDGDAT NLLRSDKAGF NMNDNSEKHE 180 GSRQTTDATT SESKYWNLNS PMRSSKSKEV VHETTTSDQR NNWMMNSKRS IHDQQGHGQE 240 NGEAAHNAPV GSSHHHSLHN PARANLSSLS GFQSNNNVMI PQSSFYHWDP SNLSLSQLGN 300 QGSGFSTSSQ TSEDPHNFNI LSMGSSSQLS ALPPGSHHQL LVCPPGATPP FFQPYATSIA 360 QMESGAQNRQ IHNHFQMLSS SSSAGNLHQN LQLNSLTPSL YSISPAGNPS SMMMMRPLQL 420 GVNITHPSSS KQLHHSQNNG GGSDNDNDHQ TNKQGNNIIT TNGLSSSFTS GYSFQNDQN

Sequence ? help Back to Top

Protein Sequence Length: 479 aa Download sequence

MQYKMITNSR GKDLTTKQEG NDNNDKITKG PAASTSRSSW SGLKDPRVVR VSRTFGGKDR  60
HSKVCTVRGL RDRRVRLSVP TAIQLYDLQD RLGLNQPSKV VDWLLNAAKD EIDELPPLQI  120
PPGAFGLYPQ PMIVSPQEVT DHMQTSLASL VDSYKDGDAT NLLRSDKAGF NMNDNSEKHE  180
GSRQTTDATT SESKYWNLNS PMRSSKSKEV VHETTTSDQR NNWMMNSKRS IHDQQGHGQE  240
NGEAAHNAPV GSSHHHSLHN PARANLSSLS GFQSNNNVMI PQSSFYHWDP SNLSLSQLGN  300
QGSGFSTSSQ TSEDPHNFNI LSMGSSSQLS ALPPGSHHQL LVCPPGATPP FFQPYATSIA  360
QMESGAQNRQ IHNHFQMLSS SSSAGNLHQN LQLNSLTPSL YSISPAGNPS SMMMMRPLQL  420
GVNITHPSSS KQLHHSQNNG GGSDNDNDHQ TNKQGNNIIT TNGLSSSFTS GYSFQNDQN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60970.1	7e-47	TCP family protein