PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026377273.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

bHLH

Protein Properties

Length: 570aa MW: 62037.5 Da PI: 5.6921

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026377273.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	35.8	1.5e-11	385	427	7	54
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 ++ErrRR+++N+++ Lr+++Pk + K++ a+iL A+eY+k+L XP_026377273.1 385 MAERRRRKKLNDRLYMLRSVVPKiS------KMDRASILGDAIEYLKEL 427 79*******************66......**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 570 aa Download sequence
MLSRINGAAA SVWMEDEGGD GEEDSISWTR NVNNNNNNNN NNNLVVLGGG GNGNGIVENC 60 NKEDEMGSLS TFKSMLEDDD TWYINTANQN PNHHHHDFQT HHQEMGGNFS TSSHHHSHNP 120 IASDNLLIHS VDSSSSCSPS SVFNIDPSSF LPPQQQKSSL SSLLNVVCNN NNNNSFDATT 180 FDLSSCEPSF LNHHQTTTNI TSFNNLITQN TSSMVDTQFG LGGGGTSFGF NSMSSFNGGF 240 DQTPNALFLN SSRSKTLRPL EIFPPVGAQP TLFQKRAALR QNSDKGGGGG LMNLEMLSSV 300 DNNKGKMSQD NWRKFSNEEE DFDEASIDGS GLNYDTDEAM EGNNNKIGES VKNSGGNNSN 360 ANSTVTGGGG DQKGKKKGLP AKNLMAERRR RKKLNDRLYM LRSVVPKISK MDRASILGDA 420 IEYLKELLQR INDLHNELES TPPGTSLPPS SSFHPLTPTP PTLPCRVKEE LCPSSLPSPN 480 SQQPARVDVR VREGRAVNIH MFCSRRPGLL LSTMRALDGL GIDIQQAVIS CFNGFALDVF 540 RAEQCKEGLD VPPEEIKAVL LNSAGFHGMI

Sequence ? help Back to Top

Protein Sequence Length: 570 aa Download sequence

MLSRINGAAA SVWMEDEGGD GEEDSISWTR NVNNNNNNNN NNNLVVLGGG GNGNGIVENC  60
NKEDEMGSLS TFKSMLEDDD TWYINTANQN PNHHHHDFQT HHQEMGGNFS TSSHHHSHNP  120
IASDNLLIHS VDSSSSCSPS SVFNIDPSSF LPPQQQKSSL SSLLNVVCNN NNNNSFDATT  180
FDLSSCEPSF LNHHQTTTNI TSFNNLITQN TSSMVDTQFG LGGGGTSFGF NSMSSFNGGF  240
DQTPNALFLN SSRSKTLRPL EIFPPVGAQP TLFQKRAALR QNSDKGGGGG LMNLEMLSSV  300
DNNKGKMSQD NWRKFSNEEE DFDEASIDGS GLNYDTDEAM EGNNNKIGES VKNSGGNNSN  360
ANSTVTGGGG DQKGKKKGLP AKNLMAERRR RKKLNDRLYM LRSVVPKISK MDRASILGDA  420
IEYLKELLQR INDLHNELES TPPGTSLPPS SSFHPLTPTP PTLPCRVKEE LCPSSLPSPN  480
SQQPARVDVR VREGRAVNIH MFCSRRPGLL LSTMRALDGL GIDIQQAVIS CFNGFALDVF  540
RAEQCKEGLD VPPEEIKAVL LNSAGFHGMI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	375	393	KKKGLPAKNLMAERRRRKK
2	387	394	ERRRRKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G26744.1	1e-101	bHLH family protein