PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026377269.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family ARF
Protein Properties Length: 864aa    MW: 95661.1 Da    PI: 6.8814
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026377269.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B374.51.2e-23168269199
                     EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 
                     f+k+lt sd++++g +++ +++a+e+      g +++ +++l+ +d++g +W++++i+r++++r++l++GW+ Fv++++L +gD ++F   + ++
  XP_026377269.1 168 FCKTLTASDTSTHGGFSVLRRHADEClppldmGRQPP-TQELVAKDLHGTEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFL--RGEN 259
                     99*****************************754544.469************************************************..4499 PP

                     E..EEEEE-S CS
              B3  90 felvvkvfrk 99 
                     +el+v+v+r+
  XP_026377269.1 260 GELRVGVRRA 269
                     99*****996 PP
2Auxin_resp1156.8e-38294376183
      Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                     a+ha+st+++F+v+Y+Pr+s++eF+v+++++++++k++ s+GmRfkm+fe+e+++e+r++Gt+vg  ++dp rWp SkWrsLk
  XP_026377269.1 294 AWHAVSTGTMFTVYYKPRTSPAEFIVPFDQYMESVKNNHSIGMRFKMRFEGEEAPEQRFTGTIVGNGESDPNRWPSSKWRSLK 376
                     89*******************************************************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 864 aa     Download sequence    
MAGSSSDATV KLNCNTTSRG GGGGDSMSSG GGDSMVKNTP SCETPRSYSN FTAGGKVTEE  60
ALYTELWHAC AGPLVTVPRE GERVFYFPQG HIEQVEASTN QVADQQMPVC DLPWKILCRV  120
INVHLKAEPD TDEVFAQVTL LPESNQDEHA VEKEPLPPAP PRPHSHSFCK TLTASDTSTH  180
GGFSVLRRHA DECLPPLDMG RQPPTQELVA KDLHGTEWRF RHIFRGQPRR HLLQSGWSVF  240
VSSKRLVAGD AFIFLRGENG ELRVGVRRAM RQQSNVPSSV ISSHSMHLGV LATAWHAVST  300
GTMFTVYYKP RTSPAEFIVP FDQYMESVKN NHSIGMRFKM RFEGEEAPEQ RFTGTIVGNG  360
ESDPNRWPSS KWRSLKVRWD ENSSIPRPDR VSPWKIEPAS TPAPNATPMP RPKRPRSNLV  420
PSSPESSCIG REGSSKVMEP ASANGFSRVL QGQETLRGTF GESNESDTAQ KPVAWPRSTE  480
DEKADMISRE RVFGTENWAP PVRHEHAFTD LLSGFRSSND SPRRFSTHLV DQTRDNSSSK  540
KHIQDQEVKF NFAGSWSMLP SGHSVNMLDS GVKVPAQTGE NSYQNQGAVK YGGLGGYPVL  600
QSLRVEQQPT NWLMPLLPPS HSGTLHHPIG VRPQVTSMQR DTLKPKSDGN CKLFGIALNS  660
NPVVPEPTGS HVNMTHTQAA TMHPNPQIPH ALESDQQSEQ SKGSRSADTT PVGIEQETSI  720
QACQQRSGDV QSLVQASSMR SCTKVHKQGI ALGRSVDLTK FNNYDDLITE LDKMFEFDGE  780
LMAPSKNWLV VYTDNENDMM LVGDDPWKEF CSMVRKIFIY TKEEVQRMNK GTLNSKGEES  840
TALGEEKASP IEVRCQQLPS VENC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62000.30.0ARF family protein