PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026377047.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family C3H
Protein Properties Length: 318aa    MW: 35715 Da    PI: 4.8746
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026377047.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH21.93.1e-07106128427
                     ---SGGGGTS--TTTTT-SS-SSS CS
         zf-CCCH   4 elCrffartGtCkyGdrCkFaHgp 27 
                     ++C f++  G+C+ Gd+C+F+Hgp
  XP_026377047.1 106 VPCYFYFN-GFCNKGDKCTFMHGP 128
                     69******.*************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    
MDIKKGNTDC VYFLASPLTC KKGMECEFRH SEVARLNPRD CYYWLAGNCL NPTCSFRHPP  60
LERPETTSEP ATVPQQSSLP ATVPQQSSLP ATVPQHSSVL VNKVSVPCYF YFNGFCNKGD  120
KCTFMHGPND VSATRKVPKK TPVVNIHPPE TKMYTESIKV QPAIEAPSNP VRCITSKSAV  180
KVQFRPQEVA PQPVKSKVLE RSLSLQASLP GNEEEPIKSD TPCSAEDVSE QSPSPEQKSS  240
EEQVEEEHIE REEWWESSPG LDVLVDNGLG EYEDDHEYVP VHDREAVRLH DHILQREYKD  300
SVGYDPMEYT GGEVMYVC