PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026377031.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

TCP

Protein Properties

Length: 351aa MW: 36604 Da PI: 9.9262

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026377031.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	125.6	5.4e-39	81	165	2	85
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasns 85 a+k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++ti+WLl+qa+p+i+++tgt++++as+ a++s+s++++s XP_026377031.1 81 APKRSSNKDRHTKVDGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLTQAEPSIIAATGTGTIPASALaAAGASVSAQGTS 165 789******************************************************************9995444555444422 PP

Sequence ? help Back to Top
Protein Sequence Length: 351 aa Download sequence
MDPKPSSKQH HHQETPKFLG LPPSNNNMVS SGGGGGGGGG EHNHNNTNNN NKPAEIKDFQ 60 IVVAEKDDNG GSTNNTKKQL APKRSSNKDR HTKVDGRGRR IRMPALCAAR IFQLTRELGH 120 KSDGETIQWL LTQAEPSIIA ATGTGTIPAS ALAAAGASVS AQGTSATAGL HQKLDELSGG 180 NAGRTNWALL GGSNLGRSHG LWPSMSQFSA GGGPGGFVSP PSAGGGGGPS TSNLGNESSN 240 FLPRIGFHGF ELPGSNMGPM SFSSILGAGG GGGGNQQLPG LELGLSQDGH IGVLNPQALN 300 QFYQQMAQSR TGTSSLHHQQ EQHHQQQQQQ QQQQQQQQQP PTKDDSQGSR H

Sequence ? help Back to Top

Protein Sequence Length: 351 aa Download sequence

MDPKPSSKQH HHQETPKFLG LPPSNNNMVS SGGGGGGGGG EHNHNNTNNN NKPAEIKDFQ  60
IVVAEKDDNG GSTNNTKKQL APKRSSNKDR HTKVDGRGRR IRMPALCAAR IFQLTRELGH  120
KSDGETIQWL LTQAEPSIIA ATGTGTIPAS ALAAAGASVS AQGTSATAGL HQKLDELSGG  180
NAGRTNWALL GGSNLGRSHG LWPSMSQFSA GGGPGGFVSP PSAGGGGGPS TSNLGNESSN  240
FLPRIGFHGF ELPGSNMGPM SFSSILGAGG GGGGNQQLPG LELGLSQDGH IGVLNPQALN  300
QFYQQMAQSR TGTSSLHHQQ EQHHQQQQQQ QQQQQQQQQP PTKDDSQGSR H

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G27010.1	2e-54	TCP family protein