PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM91392.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family ERF
Protein Properties Length: 318aa    MW: 34358.6 Da    PI: 6.8948
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM91392.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP267.23.1e-21150200256
         AP2   2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkklege 56 
                 +y+GVr+++ +g+W+AeIrd +     + +r++lg+f+tae Aa+a+++a+++++g+
  OWM91392.1 150 KYRGVRQRP-WGKWAAEIRDpF-----KaTRVWLGTFDTAEAAARAYDEAALRFRGN 200
                 8********.**********66.....56*************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    
MCVLKVANSR DAKDGRADGS WPYWEPSQSG QDNQAGMRFP GHLTREREMS VMVSALARVV  60
SGDAAQHSDS GSSSSGSGGF AQEFGYFSHG GTASSYNTIT AMEGPTPNYI TAIHPGDQSE  120
VVPPTYEYST SSSEATARES SSSASQPRRK YRGVRQRPWG KWAAEIRDPF KATRVWLGTF  180
DTAEAAARAY DEAALRFRGN KAKLNFPENV RLVTTSPSNY GSTDPSFSAA NSWPGIPSTA  240
TSSQAPLEIS RSYVSFPQGH QKQPMSLYEQ MFAPSYLSPA RFPAPPHGQG QPPGSGNGSA  300
VQVDDEEFPW LDLGGRHN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G43160.11e-19ERF family protein