PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM91138.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

bHLH

Protein Properties

Length: 263aa MW: 28582.7 Da PI: 8.3941

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM91138.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	38.7	1.9e-12	75	121	3	54
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h+e+ErrRR+riNs +++Lr l+P +K++Ka+ L ++++ +k+L OWM91138.1 75 KSHSEAERRRRERINSHLATLRGLVPCT-----EKMDKATLLAEVINQVKKL 121 58***********************8.....8**********999888 PP

Sequence ? help Back to Top
Protein Sequence Length: 263 aa Download sequence
MALPAYDTSF SFGADCFNLF NPLSRSFPGF SGLSCSGSAV PQSLVLGNEE GKLVKASASI 60 AKKAASPEKA LAALKSHSEA ERRRRERINS HLATLRGLVP CTEKMDKATL LAEVINQVKK 120 LKSNAIKATE GLLIPMDADE VNVELCKDET GDGSFSLRAS ICCEYRPTLL SEIRKAFEAL 180 PLKPVKAEIS AVGSRLKNIF IFTSQRCTGD GDLEEGQHHI ESVRYALNLI LEKAPDSSEY 240 CPRSTPPSKR RRVFSTDSLS SSP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	81	86	ERRRRE
2	82	122	RRRRERINSHLATLRGLVPCTEKMDKATLLAEVINQVKKLK
3	249	253	KRRRV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68810.1	1e-35	bHLH family protein