PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM90757.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family Trihelix
Protein Properties Length: 577aa    MW: 64195.6 Da    PI: 6.5913
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM90757.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix96.32.8e-3045129187
    trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 
                 rW++qe+laL+++r++m+ ++r++++k+plWeevs+k++e g++rs+k+Ckek+en+ k++k+++eg+ ++  ++ +t+++fdqlea
  OWM90757.1  45 RWPRQETLALLKIRSDMDVAFRDSSAKGPLWEEVSRKLAELGYHRSAKKCKEKFENVYKYHKRTREGRTGK--QDGKTYRFFDQLEA 129
                 8********************************************************************95..67778*******85 PP
2trihelix103.12.1e-32412497187
    trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 
                 rW+k ev aLi++r++++++++++  k+plWee+s++mr+ g+ers+k+Ckekwen+nk++kk+ke++kkr  e+s+tcpyf+ql+a
  OWM90757.1 412 RWPKVEVEALIRLRTNLDSKYQENGPKGPLWEEISSQMRKLGYERSSKRCKEKWENINKYFKKVKESNKKR-REDSKTCPYFQQLDA 497
                 8*********************************************************************8.78999********85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 577 aa     Download sequence    
MLGGEGGGGG EEAGPPGMVG SSGENEAGQG SGEERGGGLF GSGNRWPRQE TLALLKIRSD  60
MDVAFRDSSA KGPLWEEVSR KLAELGYHRS AKKCKEKFEN VYKYHKRTRE GRTGKQDGKT  120
YRFFDQLEAF DNHPQITSAP PSLPLPANVV PPPALPSTSP TNPPTAAVPS ATTQNVVPNI  180
VTNSVNYLPH TSLPVPNPTT VPQSVANPSN PFPVMSKDVH PHSTSSSTFS DEGLRGGGAG  240
GGGDGLRHKR KRKWKGFFER LMKEVMDKQE ELQKKFLEAI EKREHERLVR EESWRMQEMA  300
RINREREILA QERSMAAAKD TAVMAFLQKI ADQQPGLAAV QNTNNNLPTT ASTPSRARAP  360
APPPPPPPQL QLQPVALPVE APPPQPSANI EFRKSDNGDS HSIVPPPTSS SRWPKVEVEA  420
LIRLRTNLDS KYQENGPKGP LWEEISSQMR KLGYERSSKR CKEKWENINK YFKKVKESNK  480
KRREDSKTCP YFQQLDAIYR ERSSKIMDMA PLMVTPEQQW HPQQDQSRPD LAMDDMESEH  540
MDHDLDEDHD DGDDEEEDGG EYEIVATSKP STNGDTQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76880.11e-152Trihelix family protein