PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM90466.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

E2F/DP

Protein Properties

Length: 444aa MW: 49588.9 Da PI: 8.3283

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM90466.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	53.9	3e-17	59	113	12	71
E2F_TDP 12 kflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 +fl+l+ ++ + ++l++++++L v +rRRiYDi+NVLe+++++++++kn++ wkg OWM90466.1 59 SFLSLYDREGIESICLDDATSKL---GV--ERRRIYDIVNVLESIGMLARTAKNKYAWKG 113 69999999888**********.....****************************98 PP
2	E2F_TDP	62.6	5.7e-20	184	297	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvse........................................dvknkrRRiYDilNVLealnli 59 r+eksL+llt++f+kl+ +++ ++ +l+e+a+ L+ + k+RR+YDi+NVL+++nli OWM90466.1 184 RREKSLGLLTKNFVKLFVCTDVNMHSLDEAASLLLGDgrnsailksnififalsiawnleefenfglltelflikypAA--KVRRLYDIANVLSSMNLI 280 689*********************************************************************97645..89************ PP E2F_TDP 60 ek.....kekneirwkg 71 ek ++k+++rw g OWM90466.1 281 EKthtsdTRKPAFRWLG 297 **99*****87 PP

Sequence ? help Back to Top
Protein Sequence Length: 444 aa Download sequence
MEERATTLTS NSAAKSLQRH YSYSRKQKSL GLLCTKYSPP PLSVSPNSFT SQFELVWCSF 60 LSLYDREGIE SICLDDATSK LGVERRRIYD IVNVLESIGM LARTAKNKYA WKGFGGIPRA 120 LEELMAEEGP TKGSLNGSVD GSCVKELEDD DDDESLSNPN TGSQNDKSDA SMPSVSASSR 180 ADSRREKSLG LLTKNFVKLF VCTDVNMHSL DEAASLLLGD GRNSAILKSN IFIFALSIAW 240 NLEEFENFGL LTELFLIKYP AAKVRRLYDI ANVLSSMNLI EKTHTSDTRK PAFRWLGPKP 300 KSDVGTASVL EIKDPKKRMF GTDITNTIHD GSKGSSSVKR DSNCMAKVQK LYKQESLVGE 360 SNGSKLKESR QIQHYQFGPF APVDASKGDA PESRKVKQPQ DWDSFASKFR PHYQNQALRD 420 LFSHYIEAWN TWFYEVAEKK PTGS

Sequence ? help Back to Top

Protein Sequence Length: 444 aa Download sequence

MEERATTLTS NSAAKSLQRH YSYSRKQKSL GLLCTKYSPP PLSVSPNSFT SQFELVWCSF  60
LSLYDREGIE SICLDDATSK LGVERRRIYD IVNVLESIGM LARTAKNKYA WKGFGGIPRA  120
LEELMAEEGP TKGSLNGSVD GSCVKELEDD DDDESLSNPN TGSQNDKSDA SMPSVSASSR  180
ADSRREKSLG LLTKNFVKLF VCTDVNMHSL DEAASLLLGD GRNSAILKSN IFIFALSIAW  240
NLEEFENFGL LTELFLIKYP AAKVRRLYDI ANVLSSMNLI EKTHTSDTRK PAFRWLGPKP  300
KSDVGTASVL EIKDPKKRMF GTDITNTIHD GSKGSSSVKR DSNCMAKVQK LYKQESLVGE  360
SNGSKLKESR QIQHYQFGPF APVDASKGDA PESRKVKQPQ DWDSFASKFR PHYQNQALRD  420
LFSHYIEAWN TWFYEVAEKK PTGS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G48160.2	1e-96	E2F/DP family protein