PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM90460.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family MYB_related
Protein Properties Length: 315aa    MW: 33187.9 Da    PI: 8.2549
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM90460.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding42.41.6e-13107151347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+ l++ + ++ G+g+W+ I+r + k+Rt+ q+ s+ qky
       OWM90460.1 107 PWTEEEHRLFLLGLERVGKGDWRGISRNFVKTRTPTQVASHAQKY 151
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    
MSGSCETNDD SPIAGGGSGS GEIMLFGVRL VVDSMRKSVS LSNLSQYVHP QDLNSSSNGG  60
SGSNGAGVAN KEDASAATAA AVAGYASSDD VVHNSSSSGR ERKRGVPWTE EEHRLFLLGL  120
ERVGKGDWRG ISRNFVKTRT PTQVASHAQK YFLRRSNLNR RRRRSSLFDI TNETVTANPT  180
EKTPVSHQDN VTPALPVQPA TPTLEACSGS GFPMVSATPF TVPVVLPISL ENPAGNLALR  240
QAIKVEDSTS NLIRPVPAVP APQASIGSDL SLSLKTLTET PASLSLNLSL QSGQRDSAFH  300
AMSSFSNGEN IISVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74840.19e-42MYB_related family protein