PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM90434.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

WRKY

Protein Properties

Length: 500aa MW: 53922.8 Da PI: 7.1267

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM90434.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	94.7	6.6e-30	211	270	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK kg+++pr+YYrCt +Cpv+k+v+r+aed +++++tYeg+Hnh+ OWM90434.1 211 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVGpSCPVRKQVQRCAEDMSILTTTYEGTHNHP 270 58*************************88**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 500 aa Download sequence
MDAFDLQEKD QLESARAEMG QVREENLRLK QYLDQIMRDY NNLQMQFLDV AKQGDHKPSV 60 DAIRKHKDID DQGTGRESEL VSLSLGRAPS SSDSKKEQEK IDKPLSSSPK KGNVDKEKFQ 120 LEEEDQELKL GLECKFEVEK PGTIESTLPT NLSPTNSFEE QREEEPGQTW PPSKAPKTMR 180 SGDNEVSQQD NNNPVKKARV SVRARCDAPT MNDGCQWRKY GQKIAKGNPC PRAYYRCTVG 240 PSCPVRKQVQ RCAEDMSILT TTYEGTHNHP LPMSATAMAS TTSAAAQMLL SGSSSSSSNP 300 GQGPSTATNL HGMNYHLSPE TLRPGGAIRS PFYLPTASSL SSCPTVTLDL TSSNPSSSSS 360 SHLFTRFNPS TYSTYPPILS SSRPFSSTST LSFGSSDSIP SALPITSWGI NTGGSGLPSY 420 ATSSGYINKS QEDNKVGSIY QSYLQKNSSS SSNIALPDTI AAATKAITAD PSFQSVLAAA 480 LKSIIGSRNG IGPGNSGGAQ

Sequence ? help Back to Top

Protein Sequence Length: 500 aa Download sequence

MDAFDLQEKD QLESARAEMG QVREENLRLK QYLDQIMRDY NNLQMQFLDV AKQGDHKPSV  60
DAIRKHKDID DQGTGRESEL VSLSLGRAPS SSDSKKEQEK IDKPLSSSPK KGNVDKEKFQ  120
LEEEDQELKL GLECKFEVEK PGTIESTLPT NLSPTNSFEE QREEEPGQTW PPSKAPKTMR  180
SGDNEVSQQD NNNPVKKARV SVRARCDAPT MNDGCQWRKY GQKIAKGNPC PRAYYRCTVG  240
PSCPVRKQVQ RCAEDMSILT TTYEGTHNHP LPMSATAMAS TTSAAAQMLL SGSSSSSSNP  300
GQGPSTATNL HGMNYHLSPE TLRPGGAIRS PFYLPTASSL SSCPTVTLDL TSSNPSSSSS  360
SHLFTRFNPS TYSTYPPILS SSRPFSSTST LSFGSSDSIP SALPITSWGI NTGGSGLPSY  420
ATSSGYINKS QEDNKVGSIY QSYLQKNSSS SSNIALPDTI AAATKAITAD PSFQSVLAAA  480
LKSIIGSRNG IGPGNSGGAQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G18860.1	3e-63	WRKY family protein