PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM90426.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family bHLH
Protein Properties Length: 90aa    MW: 10237.6 Da    PI: 9.3987
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM90426.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH24.55.1e-0823591854
                HHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH 18 safeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                +  ++L++llP++ + +s K+s + +L+++++YI+sL
  OWM90426.1 23 ELVSRLQQLLPELRHRRSDKVSASKVLQETCNYIRSL 59
                55689*******879********************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 90 aa     Download sequence    
MSSRRSRSRQ SASSGISDDQ IIELVSRLQQ LLPELRHRRS DKVSASKVLQ ETCNYIRSLH  60
REVDDLSERL SELLATSDTA QAAIIRNLLM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74500.12e-36bHLH family protein