PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM90346.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

Dof

Protein Properties

Length: 338aa MW: 36177.9 Da PI: 6.8339

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM90346.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	125.7	1.4e-39	29	88	3	62
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 + alkcprCds+ntkfCyynny+lsqPr+fCk+CrryWtkGG lrnvPvGgg+rknk+s+ OWM90346.1 29 QGALKCPRCDSMNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGVLRNVPVGGGCRKNKRSK 88 5689*****************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 338 aa Download sequence
MQDLQSIARE RMFGPALERR LRPLSHHHQG ALKCPRCDSM NTKFCYYNNY NLSQPRHFCK 60 SCRRYWTKGG VLRNVPVGGG CRKNKRSKSK PSPPPASNNN ISPAAAAAAL AEAAQTAASS 120 PPLQERKSSP YSSSESSSLT AAAASASATE SVSGTAHPVA SFPSDAAMLN FRDYESLVVP 180 AADPANNPDH GTSFSALLGP GAETGAFTAV FGSFTGPVTA EAEAVPCGLE LNSVLLGQHS 240 HDTCQQPQWQ NGEDQSRSIG GIFDQTVQVD FTAMGSGSCG GGFGPLDWQI KNQGEFDFTT 300 TVNQAYWSQG QSQWTDRQDE GGHHSEPLPP VNFSQFLF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60850.1	8e-34	Dof family protein