PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM89918.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

Trihelix

Protein Properties

Length: 324aa MW: 37634.1 Da PI: 4.1315

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM89918.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	30.2	1.2e-09	65	147	2	86
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 Wt+q +L+++ ++ +l+r++l+ +W ev++k+ + +e+s + C++ +++l+++y+ki+ + + + ++++++++ OWM89918.1 65 WTDQLSFLLLDVWGQRFLELGRRSLRSEDWVEVAEKVtLKSRVEVSEVDCRQQLDKLKRKYRKIRSDSTGM-A--NYGWKFYKKMD 147 9999999****************************889999*******************99985.3..3459**997 PP

Sequence ? help Back to Top
Protein Sequence Length: 324 aa Download sequence
MAEPYSFRQS KKSSHRTKLP FDYQNPYPSY EGYGGESDRQ PPKRQRLDGV EQEYAPNSSG 60 GPSIWTDQLS FLLLDVWGQR FLELGRRSLR SEDWVEVAEK VTLKSRVEVS EVDCRQQLDK 120 LKRKYRKIRS DSTGMANYGW KFYKKMDMLL GMEMEEDGPP LPCGIDSGEY CFADTRVYLN 180 RSNAFDEMRD SPCESEEMED DEEEEEEEDD DLPPRRKLGG DGEEGMRVLA DSIERFGKLY 240 ERIESDKREQ MMELRKMRAD FDRELELQKE EILEKASAEI AKLRAGADGS DDNDSNDEIN 300 EEDEEEENRD DDDDGEEEDG CNGV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24490.1	1e-54	Trihelix family protein