PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM89883.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

CPP

Protein Properties

Length: 609aa MW: 64689.2 Da PI: 7.3263

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM89883.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	45.2	1.9e-14	122	161	2	42
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkeek 42 ++k+CnCk+s+Clk+YCeCfa+g +C+ C+C +C+N+ e+ OWM89883.1 122 KQKQCNCKHSRCLKLYCECFASGIYCDG-CNCMNCHNNVEN 161 89************************.******9875 PP
2	TCR	51.6	1.9e-16	207	246	1	40
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 k++kgCnCkks ClkkYCeCf+a+ Cse+C+C dCkN e OWM89883.1 207 KHNKGCNCKKSGCLKKYCECFQANILCSENCRCMDCKNFE 246 589***********************************65 PP

Sequence ? help Back to Top
Protein Sequence Length: 609 aa Download sequence
MGEGEDPGKE KQSDAAANAG ITGDHPAKKL ARQLDFTGFS GDNPGGSSSA LPEHPQTQTL 60 AQTKEAPVPL APAPAPSAAA APAPARPVPP RVPHPVVRAV KPESPKARPR SNADGKDGTP 120 KKQKQCNCKH SRCLKLYCEC FASGIYCDGC NCMNCHNNVE NEAARREAVE NTLERNPNAF 180 RPKIAGSPHG IRDSREDITG ETLLSAKHNK GCNCKKSGCL KKYCECFQAN ILCSENCRCM 240 DCKNFEGSEE RQALFHGDHS HNMTYIQQAA NAAITGAIGS SGYACAPLSR KRKGQELFFG 300 STVKDPSNQR VEQFPQGNHV RAATSSSLSS IPVAPGGGPA LLGPSKYTYR SLLADIIQPQ 360 DVKELCSVLV VLSEEAAKTL AEQKDAKEKL VTEQTETSLS LSAKQGTQNQ EVDGDKTVAE 420 DRSSASQAPD KSGRDESDTE ASADAPTQRP MSPGTLALMC DEQDTMFLTS ASSNGLMGAG 480 GNSNPQLPPG KGMTEIYREQ ERLVLTTLRD CLNKLITVGE IKETKYSSLA RAESGGQEDP 540 INNGTASERS RAGDKQNPVS NGLTKPVPPA GKPSQATAVT AVASTYIDIA KNQLPSENGS 600 SQQKIEKAN

Sequence ? help Back to Top

Protein Sequence Length: 609 aa Download sequence

MGEGEDPGKE KQSDAAANAG ITGDHPAKKL ARQLDFTGFS GDNPGGSSSA LPEHPQTQTL  60
AQTKEAPVPL APAPAPSAAA APAPARPVPP RVPHPVVRAV KPESPKARPR SNADGKDGTP  120
KKQKQCNCKH SRCLKLYCEC FASGIYCDGC NCMNCHNNVE NEAARREAVE NTLERNPNAF  180
RPKIAGSPHG IRDSREDITG ETLLSAKHNK GCNCKKSGCL KKYCECFQAN ILCSENCRCM  240
DCKNFEGSEE RQALFHGDHS HNMTYIQQAA NAAITGAIGS SGYACAPLSR KRKGQELFFG  300
STVKDPSNQR VEQFPQGNHV RAATSSSLSS IPVAPGGGPA LLGPSKYTYR SLLADIIQPQ  360
DVKELCSVLV VLSEEAAKTL AEQKDAKEKL VTEQTETSLS LSAKQGTQNQ EVDGDKTVAE  420
DRSSASQAPD KSGRDESDTE ASADAPTQRP MSPGTLALMC DEQDTMFLTS ASSNGLMGAG  480
GNSNPQLPPG KGMTEIYREQ ERLVLTTLRD CLNKLITVGE IKETKYSSLA RAESGGQEDP  540
INNGTASERS RAGDKQNPVS NGLTKPVPPA GKPSQATAVT AVASTYIDIA KNQLPSENGS  600
SQQKIEKAN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29000.1	1e-168	CPP family protein