PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM89822.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family ERF
Protein Properties Length: 290aa    MW: 30974.9 Da    PI: 4.3938
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM89822.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.53.9e-194290355
         AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                + GVr+++ +gr++AeIrdps+   + r++lg+f+taeeAa a+++a+++++g
  OWM89822.1 42 FLGVRRRP-WGRYAAEIRDPST---KERHWLGTFDTAEEAALAYDRAARSMRG 90
                67******.**********965...5*************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    
MEFIGNSVNT ASPSKARRKQ QQPPPPSQQD DPAAGGVAPV RFLGVRRRPW GRYAAEIRDP  60
STKERHWLGT FDTAEEAALA YDRAARSMRG PKARTNFVYS DMPPGSSVTS IISPDEEQND  120
MSAFFMSAVP QHQNHVPANQ IVFSHQGGSV GTEGGQNSTG LPVSDSWCSG AAEFGSCTYP  180
SSITSFTDSG SEPRLPTYDD TELPPLPPDM STFCSSGFAG PDSGSGLGPG GWDNDMGLFG  240
LQGQGVNGVG MGCNGQYMDF DQNEFVQHNP IFGNTAMDGF DLGSPSAYYF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28160.12e-34ERF family protein