PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM89689.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family ERF
Protein Properties Length: 386aa    MW: 42396.3 Da    PI: 8.4709
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM89689.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.51.6e-1859109155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 ++y+GVr+++ +gr++AeIrdp     +  r +lg+f+taeeAa a++ a+++++g
  OWM89689.1  59 TRYRGVRRRP-WGRYAAEIRDPQ----SkERRWLGTFDTAEEAAMAYDCAARSMRG 109
                 68********.**********93....35999**********************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 386 aa     Download sequence    
MEEALRRLNG ETMVVPSSSS SSAAPTKKCL SNVTATSSSA AVKRSLRDSS AAPNSSGVTR  60
YRGVRRRPWG RYAAEIRDPQ SKERRWLGTF DTAEEAAMAY DCAARSMRGI KARTNFLYPP  120
SPEVQPHRLM KMLPSNHGNI TDYFNVFSPR QLSPSHLHVP TACHGHRTPL QPPPVAEPAS  180
AQKNKLLLRR DFMYPNSYGH LQLGTAAASC SSPLASATIS DGNVTDPHGN CGEFHPFMNA  240
DSTMNMASSE IEFFPQLSEP SDSGLLEEVI RQGFLPKPSS KKNIDGAAPG YTSEESRPAV  300
HHHQSSYEVK REARDNDAGA VPGHYHKIRN VHQYLQGFDV SGTRDHGGNV LSSSANQLLV  360
EDQESIFSDI IHYPEIIRAF AARVQN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G24590.13e-16ERF family protein