PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM89434.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

bHLH

Protein Properties

Length: 331aa MW: 36623.5 Da PI: 6.0748

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM89434.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	33.8	5.9e-11	50	115	2	55
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC................TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkas.............kapskKlsKaeiLekAveYIksLq 55 r +h+ E+rRR++iN++f+ Lr+l+P++ k l+K L ++++Y+k+Lq OWM89434.1 50 RSKHSVTEQRRRSKINERFQILRDLIPHSEqkrdtasfllevfK-LLYQLTKQNALLQVIDYVKYLQ 115 899*************************6337777777777741.3345777777777777777776 PP

Sequence ? help Back to Top
Protein Sequence Length: 331 aa Download sequence
MKSGKGNQEY EEYEEDDFNP KRDGPSSNTS NTNATGNTKD KNSDKANAIR SKHSVTEQRR 60 RSKINERFQI LRDLIPHSEQ KRDTASFLLE VFKLLYQLTK QNALLQVIDY VKYLQEKVQK 120 YEGSYPGWNS EPAKLMPWRN SHWRVQSFVG QPHAAKNGSA PVSMFPGKFE DNNVGITSNM 180 LASTQNTLEL EAGREVINKS VDQPMPTPVR TDGTADHPLQ RPAGSDLQSV AGPFTENLLN 240 QSEDLSIEGG TINISSVYSQ GLLNTLTDAL QNAGLDLSQA RISVQIDLGK RANRGQMDQD 300 GPISGNSVLA DIRDAADGEE GSGQAQKRQK T

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69010.1	1e-105	bHLH family protein