PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM89068.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family WRKY
Protein Properties Length: 322aa    MW: 34664.3 Da    PI: 10.3862
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM89068.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY99.22.5e-31235292359
                 -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                 D+++WrKYGqK++kgs+fpr+YY+C+s  gCp++k+ver+++dp+++++tYegeH+h+
  OWM89068.1 235 DEFSWRKYGQKPIKGSPFPRGYYKCSSVrGCPARKHVERAQDDPTMLIVTYEGEHRHT 292
                 99************************988****************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    
MAVDFVKFSL MDDRRAIEEA ASAGLKSMEH LIHILSAPAV QHQHHISRPA SSGGQVDCSQ  60
LTDFTVSKFK QVISLLNRTG HARFRRAPVQ IVSRVEPVAL ARPVIDLNLE AEPKPETESF  120
SRVEKECFSL SQPVSSSATS SSFLSTITGD GSVSNGKVGA ALAAAAAPAF SAGKPPLSSG  180
HRKKCHEHAL SVGGGRISSS TSAGRCHCSK RRKHRVKRTI RVPAISSKNA DIPPDEFSWR  240
KYGQKPIKGS PFPRGYYKCS SVRGCPARKH VERAQDDPTM LIVTYEGEHR HTGNPSNSFA  300
QVPEAPPPAA ATTGVTLLFQ PS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31550.12e-97WRKY family protein