PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM88894.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | DBB | ||||||||
Protein Properties | Length: 221aa MW: 24736 Da PI: 6.6857 | ||||||||
Description | DBB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-B_box | 19.3 | 2.4e-06 | 4 | 33 | 5 | 34 |
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeH 34 C+ +e+ + fC ++ lC +C ++ H OWM88894.1 4 LCDACESAAAAVFCAADEAALCLSCDEKVH 33 7**************************998 PP | |||||||
2 | zf-B_box | 26.6 | 1.3e-08 | 52 | 91 | 2 | 37 |
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg....H 37 + ++C+ +e+ ++ ++Ce +++ lC +C + H g H OWM88894.1 52 DVPRCDICENAPAFFYCEIDGTSLCLQCDMIVHVGgkrtH 91 5799**************************9996545555 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 221 aa Download sequence |
MRTLCDACES AAAAVFCAAD EAALCLSCDE KVHMCNKLAS RHVRVGLANP SDVPRCDICE 60 NAPAFFYCEI DGTSLCLQCD MIVHVGGKRT HGRYLLLRQR VEFPGDKSSH HEEPAVPSME 120 PGEARRGHPQ NQNLKPTMEE NHQNHRESAL RAPNTSDTEK LGKRDSKMID LNMKPHRMHE 180 QASFNEDDCW LVFRHPFAAL AIAMYSYFPV KSSLHDPQSS G |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38960.1 | 1e-58 | DBB family protein |