PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM88820.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family ERF
Protein Properties Length: 119aa    MW: 13402.3 Da    PI: 9.5076
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM88820.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP230.11.2e-0946831353
         AP2 13 grWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkl 53
                g++++eIrdp         r++l+++gtae+Aa a+ + ++++
  OWM88820.1 46 GKYAVEIRDP-----IhgVRVWLETYGTAEKAALAYQKKKLEF 83
                9********8.....337******************9888775 PP
Sequence ? help Back to Top
Protein Sequence    Length: 119 aa     Download sequence    
MPGLETEKVP LGSSRSSLSS REEFAKKKLN REQNLKTMRR EFEALGKYAV EIRDPIHGVR  60
VWLETYGTAE KAALAYQKKK LEFDRAVISS KNKILPIHSD SEETTASFCL PSPSSMLDA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.19e-13ERF family protein