PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM88723.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family bHLH
Protein Properties Length: 235aa    MW: 25992.5 Da    PI: 8.218
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM88723.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.22.2e-1177124454
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                 ++  rE+ RRdr+N++f eL  +l +    + +K +Ka+iL +Av+ + +L
  OWM88723.1  77 SKACREKLRRDRLNDKFLELGAILEPG---RPPKTDKAAILIEAVRMVTQL 124
                 5678**********************8...89**************99988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 235 aa     Download sequence    
MVSQENSNWL FDYGLIEDIP VPDGNFQVHN SGFSWPQPLN VGSNASVEID GSFGDSDGVK  60
ENPKKRLRSE SCGATSSKAC REKLRRDRLN DKFLELGAIL EPGRPPKTDK AAILIEAVRM  120
VTQLRGEAQK LKDSNSSLQE KIKELKAEKN ELRDEKQRLK AEKEKLEQQL KTVNTQPTFV  180
PPPPAIPAAF AAPHGQAPGN KLVPFISYPG VAMWQFMPPA SVDTSQDHVL RPPVA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16369PKKRLRS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.12e-95bHLH family protein