PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM88711.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family bHLH
Protein Properties Length: 346aa    MW: 37994.2 Da    PI: 6.2317
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM88711.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH15.82.5e-052352731154
                 HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH  11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                  R +++ +++  L++l+ +      +K + a++L +A++YIk L
  OWM88711.1 235 VRKEKMGDRITALQQLVSPF-----GKTDTASVLSEAIDYIKIL 273
                 5778999**********998.....8***************976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 346 aa     Download sequence    
MADEFHTNGS CWWKGSSKDR LESGSIIPST FSSSGQQSNM GSLFGWSASC ADSVSIISAA  60
ADSKVVSSPA DWNTNQSSLR VERGEVGFRS MLQENANMEE PSFDMDAAMY SSPSAILQSA  120
LQNRSHIGNS YGMNSTTHEL LPPLMTRTSP PEQHPHIGHL QFSNNAPFWN ASMKGTNVRS  180
SFIPSSSFQC HQQYPVDEKP KNLSDGVNVS NNIGSEASSK RTRNETPSPL PAFKVRKEKM  240
GDRITALQQL VSPFGKTDTA SVLSEAIDYI KILHEQVNVL SAPYMKSGTP MHHHQQDKDP  300
EGKEEEEQDL RSRGLCLVPV ASTFPVTHEP TGQLDFWTPP FGGPFR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20640.12e-61bHLH family protein