PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM88626.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

HB-other

Protein Properties

Length: 343aa MW: 37866.8 Da PI: 7.8386

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM88626.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	15.6	2.8e-05	18	54	30	56
HHHHHHHC..........TS-HHHHHHHHHHHHHHHH CS Homeobox 30 reeLAkkl..........gLterqVkvWFqNrRakek 56 LA+k ++ +qV +WFqN+R+ + OWM88626.1 18 LVALAEKFsnsperkgrmLVQMKQVWNWFQNKRYSIR 54 5555555555555555556889***********9766 PP

Sequence ? help Back to Top
Protein Sequence Length: 343 aa Download sequence
MEAILQEHNN TMPAREILVA LAEKFSNSPE RKGRMLVQMK QVWNWFQNKR YSIRAKSTKP 60 PGKLTISPTF RDDSNPMRNM PQPMAASVAA SIAAPTVTSV GCAPSDTSIL EFEAKSSRDG 120 AWYDVATFLT HRHLETGNPE VLVRFSGFGV DEDEWINIRQ HVRQRSLPCE ASECVAVLPG 180 DVILCFQEGK EQALYFDAQV LDAQRRRHDA RGCRCRFLVR YLHDDSEEIV PLRKVCRRPE 240 TDYRLQQLHA ATAKDLAAQQ HLQKASGESL TGNPQVQQSM VPETMPKHQI SLSTVPPVAP 300 APQHVNIAFS TGPANSTSNL GGSAPVSGAA SGGWGEKAQQ GVE

Sequence ? help Back to Top

Protein Sequence Length: 343 aa Download sequence

MEAILQEHNN TMPAREILVA LAEKFSNSPE RKGRMLVQMK QVWNWFQNKR YSIRAKSTKP  60
PGKLTISPTF RDDSNPMRNM PQPMAASVAA SIAAPTVTSV GCAPSDTSIL EFEAKSSRDG  120
AWYDVATFLT HRHLETGNPE VLVRFSGFGV DEDEWINIRQ HVRQRSLPCE ASECVAVLPG  180
DVILCFQEGK EQALYFDAQV LDAQRRRHDA RGCRCRFLVR YLHDDSEEIV PLRKVCRRPE  240
TDYRLQQLHA ATAKDLAAQQ HLQKASGESL TGNPQVQQSM VPETMPKHQI SLSTVPPVAP  300
APQHVNIAFS TGPANSTSNL GGSAPVSGAA SGGWGEKAQQ GVE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18380.1	1e-114	HB-other family protein